RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
SHOX2-206ENST00000554685 CTDSPLO15194 276 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 PDCD6O75340 191 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 HPXP02790 462 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 GLAP06280 429 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 HIST1H1DP16402 221 aaKnown RBP12.09□□□□□ -0.47
SHOX2-206ENST00000554685 FUT3P21217 361 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 PPP5CP53041 499 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 SNU13P55769 128 aaKnown RBP12.09□□□□□ -0.47
SHOX2-206ENST00000554685 KCNJ8Q15842 424 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 MICBQ29980 383 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 PYDC2Q56P42 97 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
SHOX2-206ENST00000554685 BATF2Q8N1L9 274 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 BOLLQ8N9W6 283 aaKnown RBP12.09□□□□□ -0.47
SHOX2-206ENST00000554685 CCL17Q92583 94 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHOX2-206ENST00000554685 PLEKHJ1Q9NW61 149 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 NLKQ9UBE8 527 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
SHOX2-206ENST00000554685 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
SHOX2-206ENST00000554685 A0A0A6YYD4 124 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 TRAV38-1A0A0B4J264 116 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 A0A0G2JMP0 313 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 A0A0X1KG70 313 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 OOEPA6NGQ2 149 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 SERPINE3A8MV23 424 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 LGALS8O00214 317 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 SULT1C2O00338 296 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 WNT9BO14905 357 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 DEGS1O15121 323 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 SOCS1O15524 211 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 CA11O75493 328 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 FSTL3O95633 263 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 HAND1O96004 215 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 CYB5R3P00387 301 aaPredicted RBP12.08□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF44P15621 663 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 EGR1P18146 543 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 CDKN1AP38936 164 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 PTH2RP49190 550 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 EFNA4P52798 201 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 GMFBP60983 142 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 PNLIPRP3Q17RR3 467 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 MOGAT2Q3SYC2 334 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 TEX36Q5VZQ5 186 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 BIVMQ86UB2 503 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 IZUMO1Q8IYV9 350 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 OR4M2Q8NGB6 313 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 CCDC32Q9BV29 185 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 WDR13Q9H1Z4 485 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 AUNIPQ9H7T9 357 aa12.08□□□□□ -0.48
SHOX2-206ENST00000554685 MYOZ1Q9NP98 299 aaPredicted RBP12.08□□□□□ -0.48
SHOX2-206ENST00000554685 LRRK2Q5S007 2527 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
SHOX2-206ENST00000554685 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 F12P00748 615 aaPredicted RBP12.07□□□□□ -0.48
SHOX2-206ENST00000554685 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 MELTFP08582 738 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 DAOP14920 347 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 COL8A1P27658 744 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 CHATP28329 748 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 CD80P33681 288 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PRSS3P35030 304 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 TMEM50BP56557 158 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 MRPS15P82914 257 aaKnown RBP12.07□□□□□ -0.48
SHOX2-206ENST00000554685 RBM39Q14498 530 aaKnown RBP12.07□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF79Q15937 498 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 CDNFQ49AH0 187 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 ATAD3CQ5T2N8 411 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 SNX29P2Q8IUI4 249 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 DTX3Q8N9I9 347 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PPP1R35Q8TAP8 253 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 BORCS5Q969J3 196 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 ARHGAP5-AS1Q96IT6 56 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PECRQ9BY49 303 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 DNTTIP1Q9H147 329 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 BARX1Q9HBU1 254 aaPredicted RBP12.07□□□□□ -0.48
SHOX2-206ENST00000554685 RCC2Q9P258 522 aaKnown RBP12.07□□□□□ -0.48
SHOX2-206ENST00000554685 IL36RNQ9UBH0 155 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 ABCA4P78363 2273 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 COL12A1Q99715 3063 aa12.07□□□□□ -0.48
SHOX2-206ENST00000554685 NKX6-3A6NJ46 265 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 OR2AT4A6NND4 320 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 GABARAPH6UMI1 98 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
SHOX2-206ENST00000554685 MFNGO00587 321 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 NDUFA2O43678 99 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 GSTZ1O43708 216 aaPredicted RBP12.06□□□□□ -0.48
SHOX2-206ENST00000554685 KCNJ3P48549 501 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 GNG2P59768 71 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms