RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 OR5F1O95221 314 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 IFNW1P05000 195 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 CTLA4P16410 223 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 CALB2P22676 271 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 NAA10P41227 235 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 CDKN2AP42771 156 aaKnown RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 GSK3BP49841 420 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 BMXP51813 675 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 DLX1P56177 255 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 TAS2R41P59536 307 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 ISL1P61371 349 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 HIST1H3AP68431 136 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 SNAPC1Q16533 368 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 RSPO1Q2MKA7 263 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 HIST2H3PS2Q5TEC6 136 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 ZNF826PQ6ZT77 177 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 HIST2H3AQ71DI3 136 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 CENPVQ7Z7K6 275 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 TMEM219Q86XT9 240 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 RNF113BQ8IZP6 322 aaKnown RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 FGFRL1Q8N441 504 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 LRRC75AQ8NAA5 344 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 Q8NFD4 153 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 OR9Q1Q8NGQ5 310 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 OR9I1Q8NGQ6 314 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 OR51A7Q8NH64 312 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 SLC26A7Q8TE54 656 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 TMEM255BQ8WV15 326 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 C17orf50Q8WW18 174 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 RASSF5Q8WWW0 418 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 C12orf43Q96C57 262 aaKnown RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 DUS3LQ96G46 650 aaKnown RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 MED30Q96HR3 178 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 OR5M11Q96RB7 305 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 POLR2J2Q9GZM3 115 aaKnown RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 HDHD2Q9H0R4 259 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 CSTL1Q9H114 145 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 POLR2J3Q9H1A7 115 aaKnown RBP3.87□□□□□ -1.79
ATXN3-228ENST00000554592 HIPK2Q9H2X6 1198 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 HEXA-AS1Q9H8Q6 139 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 RNPEPL1Q9HAU8 725 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 PALMDQ9NP74 551 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 VAPAQ9P0L0 249 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 RIMS3Q9UJD0 308 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 NDUFAF1Q9Y375 327 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 DNAH3Q8TD57 4116 aa3.87□□□□□ -1.79
ATXN3-228ENST00000554592 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 SACSQ9NZJ4 4579 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 A0A1B0GW55 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 PRSS37A4D1T9 235 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 A6NDX4 124 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 GGT3PA6NGU5 568 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 F5H5K5 113 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 H0YAE9 185 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 H7C1C5 153 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 ACOT8O14734 319 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 SYNGR1O43759 233 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 SLC16A7O60669 478 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 CD14P08571 375 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 ACSM4P0C7M7 580 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L2P0CJ85 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L3P0CJ86 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L4P0CJ87 422 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L5P0CJ88 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L6P0CJ89 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L7P0CJ90 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 IFI30P13284 250 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 IFNA8P32881 189 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 MC5RP33032 325 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 GGT2P36268 569 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 SNRPEP62304 92 aaKnown RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 LCN6P62502 163 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 BLCAPP62952 87 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 GAGE2BQ13066 116 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 KRTAP27-1Q3LI81 207 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 GAGE2EQ4V326 116 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 WDR38Q5JTN6 314 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 PAGE3Q5JUK9 113 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 HCP5Q6MZN7 132 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 GAGE2AQ6NT46 116 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4L9Q6RFH8 374 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 MRPL21Q7Z2W9 205 aaKnown RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 TSEN54Q7Z6J9 526 aaKnown RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 C11orf53Q8IXP5 236 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 FAM216BQ8N7L0 139 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 OR52I2Q8NH67 350 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 LRRC29Q8WV35 223 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 H1FXQ92522 213 aaKnown RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 TAMM41Q96BW9 452 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 BPIFA2Q96DR5 249 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 ADAT1Q9BUB4 502 aaKnown RBP3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DNTTIP1Q9H147 329 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 VCXQ9H320 206 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 IKZF5Q9H5V7 419 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 ABCB10Q9NRK6 738 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 MRGBPQ9NV56 204 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 DUX4Q9UBX2 424 aa3.86□□□□□ -1.79
ATXN3-228ENST00000554592 GAGE2DQ9UEU5 116 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms