RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LRRC30A6NM36 301 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 F6UZH7 168 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 BLOC1S5-TXNDC5H3BN57 136 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM50AO95807 157 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 C1QAP02745 245 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H2ABP04908 130 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 SERPINE1P05121 402 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 NGFRP08138 427 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 CST2P09228 141 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 GIPP09681 153 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 ALDOCP09972 364 aaKnown RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 DANCRP0C864 163 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM225BP0DP42 221 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 ESDP10768 282 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF43P17038 809 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 HIST1H2ADP20671 130 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 SRD5A2P31213 254 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 APLNRP35414 380 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 AVPR1BP47901 424 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 PPOXP50336 477 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 DIO3P55073 304 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 SELENOTP62341 195 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 RAP1AP62834 184 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 FASTKQ14296 549 aaKnown RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 DAZAP2Q15038 168 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 C3AR1Q16581 482 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 LRRC75BQ2VPJ9 315 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 FBXL19-AS1Q494R0 122 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 SCGB2B2Q4G0G5 96 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 FAM74A3Q4VXF1 159 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 GFRALQ6UXV0 394 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 HIST3H2AQ7L7L0 130 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 MRGPRGQ86SM5 289 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 PEG10Q86TG7 708 aaKnown RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 TGIF2LYQ8IUE0 185 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 PARP16Q8N5Y8 322 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 AQP11Q8NBQ7 271 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 OR4F6Q8NGB9 312 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 OR5AN1Q8NGI8 311 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 OR13G1Q8NGZ3 307 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 C16orf52Q8NHV5 167 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 FAM57AQ8TBR7 257 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 TRUB1Q8WWH5 349 aaKnown RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 PEX11GQ96HA9 241 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 AJUBAQ96IF1 538 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 JSRP1Q96MG2 331 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 Q96MT0 163 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 COL21A1Q96P44 957 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 UHRF2Q96PU4 802 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 RSPO3Q9BXY4 272 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-206ENST00000554429 MS4A8Q9BY19 250 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 CDCP1Q9H5V8 836 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 RNF167Q9H6Y7 350 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 EGLN3Q9H6Z9 239 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF556Q9HAH1 456 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 NMRAL1Q9HBL8 299 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 B3GNT2Q9NY97 397 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 ST6GALNAC2Q9UJ37 374 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 RIMS3Q9UJD0 308 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 HSPE1-MOB4S4R3N1 261 aa2.33□□□□□ -2.04
PRPF39-206ENST00000554429 SPTAN1Q13813 2472 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 EXPH5Q8NEV8 1989 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MED13LQ71F56 2210 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 NSG1A0A0A6YYJ2 146 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1W2PR80 420 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SLC22A20A6NK97 555 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 G3V4G9 280 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 H3BMQ9 156 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 DCTN6O00399 190 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CCL21O00585 134 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 FOXS1O43638 330 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TOXO94900 526 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 C1orf105O95561 183 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 RAB36O95755 333 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TSPAN15O95858 294 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 C6orf47O95873 294 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ISG15P05161 165 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 HPNP05981 417 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MPC1LP0DKB6 136 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 C1GALT1C1LP0DN25 315 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PVRP15151 417 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PAX1P15863 534 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF37AP17032 561 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PVALBP20472 110 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MAKP20794 623 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OPRL1P41146 370 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 XCR1P46094 333 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CDX1P47902 265 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MTPNP58546 118 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 RAB10P61026 200 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SLC18A2Q05940 514 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PPP1R1AQ13522 171 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CLINT1Q14677 625 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 HIST2H2ACQ16777 129 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PLPPR5Q32ZL2 321 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF585BQ52M93 769 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CYBRD1Q53TN4 286 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 VWA2Q5GFL6 755 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ELFN2Q5R3F8 820 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM207Q6UWW9 146 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms