RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ADNP2Q6IQ32 1131 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 ZFP1Q6P2D0 407 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 CD300LGQ6UXG3 332 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 CSGALNACT2Q8N6G5 542 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 L3HYPDHQ96EM0 354 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 SGTBQ96EQ0 304 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 TMEM243Q9BU79 118 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 C8orf17Q9NRJ1 99 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 PSME2Q9UL46 239 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 CSPG4Q6UVK1 2322 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 SDK2Q58EX2 2172 aa2.94□□□□□ -1.94
CHD8-207ENST00000554384 JMJD1CQ15652 2540 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 IGKV1-27A0A075B6S5 117 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 GOLGA6L7A0A1B0GV03 622 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 TMEM120BA0PK00 339 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 A6NDN8 102 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 ZNF99A8MXY4 864 aaPredicted RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 H0YIV9 168 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 BPY2O14599 106 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 CASC3O15234 703 aaKnown RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 CHMP2AO43633 222 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 CYTH3O43739 400 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 MPZL1O95297 269 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 HLA-DQA1P01909 254 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 DEKP35659 375 aaKnown RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 GGT2P36268 569 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 ATP6V0D1P61421 351 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 CRADDP78560 199 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 SHISA6Q6ZSJ9 500 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 OR10W1Q8NGF6 305 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 GLYATL2Q8WU03 294 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 JSRP1Q96MG2 331 aaPredicted RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 C18orf15Q96N68 181 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 NAP1L5Q96NT1 182 aaPredicted RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 RNF5Q99942 180 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 SMR3AQ99954 134 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 RSPO3Q9BXY4 272 aaPredicted RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 ZNF442Q9H7R0 627 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 RPRD1BQ9NQG5 326 aaKnown RBP2.93□□□□□ -1.94
CHD8-207ENST00000554384 NRBP2Q9NSY0 501 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 DDX19BQ9UMR2 479 aa2.93□□□□□ -1.94
CHD8-207ENST00000554384 ANKRD65E5RJM6 399 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 ERI3O43414 337 aaKnown RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 TRAPPC3O43617 180 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 SERPINB7O75635 380 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 SLC22A5O76082 557 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 RALBP11234 206 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 CD82P27701 267 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 MYCNOSP40205 109 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 CCT6AP40227 531 aaKnown RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 MAGEA1P43355 309 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 GPR1P46091 355 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 LY6EQ16553 131 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 BEX5Q5H9J7 111 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 TTC19Q6DKK2 380 aaPredicted RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 ZNF880Q6PDB4 577 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 OTUD6AQ7L8S5 288 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 KIF2BQ8N4N8 673 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 ZNF561Q8N587 486 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 TRAM1L1Q8N609 369 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 NECAP1Q8NC96 275 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 LINC01560Q8TB33 94 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 GPX8Q8TED1 209 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 GHSRQ92847 366 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 OR10C1Q96KK4 312 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 OPALINQ96PE5 141 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 SPIN2AQ99865 258 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 SPIN2BQ9BPZ2 258 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 LZTS2Q9BRK4 669 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 PSTPIP2Q9H939 334 aa2.92□□□□□ -1.94
CHD8-207ENST00000554384 RRAGDQ9NQL2 400 aaPredicted RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 FBXO6Q9NRD1 293 aaPredicted RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 RP1L1Q8IWN7 2480 aaPredicted RBP2.92□□□□□ -1.94
CHD8-207ENST00000554384 COL6A5A8TX70 2615 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 KNL1Q8NG31 2342 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 IGKV6-21A0A0C4DH24 114 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 A0A1W2PRD5 423 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 C7orf66A4D0T2 115 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 IGLV3-25P01717 112 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 HLA-DQB1P01920 261 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 PFN2P35080 140 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 RAB11AP62491 216 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 LAMTOR4Q0VGL1 99 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 DOC2AQ14183 400 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 TSC22D1Q15714 1073 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 RAB11BQ15907 218 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 ZNF829Q3KNS6 432 aaPredicted RBP2.91□□□□□ -1.94
CHD8-207ENST00000554384 SDHAF4Q5VUM1 108 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 APRG1Q8IVJ8 170 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 OSR2Q8N2R0 312 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 TMEM256Q8N2U0 113 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 HAUS1Q96CS2 278 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 TIMM29Q9BSF4 260 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 CALN1Q9BXU9 219 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 NCOR1P1Q9H4R4 102 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 FBXO8Q9NRD0 319 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 ZMAT5Q9UDW3 170 aaKnown RBP2.91□□□□□ -1.94
CHD8-207ENST00000554384 SAR1BQ9Y6B6 198 aa2.91□□□□□ -1.94
CHD8-207ENST00000554384 FLNAP21333 2647 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms