RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TMEM91Q6ZNR0 172 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF788Q6ZQV5 615 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 CENPSQ8N2Z9 138 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 PARP16Q8N5Y8 322 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 POC1AQ8NBT0 407 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 OR2G2Q8NGZ5 317 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 ANGPTL6Q8NI99 470 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 MED30Q96HR3 178 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 CEP19Q96LK0 163 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 PCGF1Q9BSM1 259 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 CHST5Q9GZS9 411 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 MS4A7Q9GZW8 240 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 ZMAT3Q9HA38 289 aaKnown RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 RASL12Q9NYN1 266 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4Q9UBX2 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 RPUSD1Q9UJJ7 312 aaKnown RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 SIRT4Q9Y6E7 314 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 J3QLW9 94 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 CTDSP2O14595 271 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 SIGLEC5O15389 551 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 TOX4O94842 621 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 CLEC2LP0C7M8 214 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 PGA5P0DJD9 388 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 MMP9P14780 707 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF19P17023 458 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 MPZP25189 248 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 TNFSF8P32971 234 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 MTNR1BP49286 362 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 CCR9P51686 369 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 GBX2P52951 348 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-211ENST00000554310 OR12D2P58182 307 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 BPIFB3P59826 476 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 MXD1Q05195 221 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 IKZF1Q13422 519 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 CNN3Q15417 329 aaKnown RBP10.8□□□□□ -0.68
SHMT2-211ENST00000554310 CCDC58Q4VC31 144 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 DMRTC1Q5HYR2 192 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 TMEM244Q5VVB8 128 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 MS4A15Q8N5U1 240 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 SIGLECL1Q8N7X8 197 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 OR5T2Q8NGG2 359 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 HAVCR2Q8TDQ0 301 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 FAM216AQ8WUB2 273 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 PP6455Q8WZ26 134 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-211ENST00000554310 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 SIRPDQ9H106 197 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF222Q9UK12 451 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 SLC7A11Q9UPY5 501 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 KPTNQ9Y664 436 aa10.8□□□□□ -0.68
SHMT2-211ENST00000554310 IGKV1D-17A0A075B6S4 117 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 IGHV3OR16-10A0A075B7F0 116 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 E9PI62 339 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 NOS1APO75052 506 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 SC5DO75845 299 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 SERPINA3P01011 423 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 ISG15P05161 165 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 SFTPBP07988 381 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 ACAA1P09110 424 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 OCM2P0CE71 109 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 OCMP0CE72 109 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 CAV3P56539 151 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 UBA52P62987 128 aaKnown RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 MRPL28Q13084 256 aaKnown RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 OXA1LQ15070 435 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 CDK5R1Q15078 307 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 PDCD1Q15116 288 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 ACP7Q6ZNF0 438 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 FGFRL1Q8N441 504 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 ZDHHC22Q8N966 263 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 C8orf46Q8TAG6 207 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 RPS4Y2Q8TD47 263 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 PPP1R14BQ96C90 147 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 SDSLQ96GA7 329 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 PGLYRP3Q96LB9 341 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 TBX15Q96SF7 602 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 NRIP2Q9BQI9 281 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 PKIBQ9C010 78 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 SLC25A10Q9UBX3 287 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-211ENST00000554310 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
SHMT2-211ENST00000554310 DNAJC9-AS1A6NH13 148 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 A6NIN4 97 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 H3BSH0 61 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 SYNGR1O43759 233 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 PSG2P11465 335 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 SELLP14151 372 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 GABRA2P47869 451 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 FUT6P51993 359 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 NANOS3P60323 173 aaKnown RBP10.78□□□□□ -0.68
SHMT2-211ENST00000554310 PPP3R1P63098 170 aa10.78□□□□□ -0.68
SHMT2-211ENST00000554310 ACTG1P63261 375 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms