RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 TTTY10Q9BZA0 68 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 NPFFR1Q9GZQ6 430 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 CHST5Q9GZS9 411 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 PPA2Q9H2U2 334 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 GPR173Q9NS66 373 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 CHCHD3Q9NX63 227 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 SCN3BQ9NY72 215 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 BLOC1S6Q9UL45 172 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 EXOSC1Q9Y3B2 195 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 TPRKBQ9Y3C4 175 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 TBL2Q9Y4P3 447 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 A0A0G2JK05 382 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PQL4 384 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 DAPL1A0PJW8 107 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 METTL15A6NJ78 407 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 ODF3BA8MYP8 253 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 M0R129 80 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 MAGEB4O15481 346 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 SYT7O43581 403 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF737O75373 536 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 GATBO75879 557 aaKnown RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 TSPAN15O95858 294 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 CSF1P09603 554 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 MYL12AP19105 171 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 DYNLT3P51808 116 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 LGALS4P56470 323 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 MEF2CQ06413 473 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF273Q14593 569 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 UBE2V2Q15819 145 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 CCDC58Q4VC31 144 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 DMRTC1Q5HYR2 192 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 RBM48Q5RL73 367 aaKnown RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 C6orf141Q5SZD1 244 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 FDX2Q6P4F2 183 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 TMPRSS11AQ6ZMR5 421 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 Q6ZTK2 550 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 SSX6Q7RTT6 188 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 FAM220AQ7Z4H9 259 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 BCDIN3DQ7Z5W3 292 aaKnown RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 OR8H2Q8N162 312 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 YIPF7Q8N8F6 280 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 DNAAF1Q8NEP3 725 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 OR10H4Q8NGA5 316 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 OR11H6Q8NGC7 330 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 OR2T6Q8NHC8 308 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PPP1R35Q8TAP8 253 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PIFOQ8TCI5 191 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 APH1BQ8WW43 257 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PP6455Q8WZ26 134 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 CFHR4Q92496 578 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 RORBQ92753 470 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 MYDGFQ969H8 173 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 FOXRED1Q96CU9 486 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 LGALS12Q96DT0 336 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 MALSU1Q96EH3 234 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 TMEM80Q96HE8 168 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 SNX22Q96L94 193 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 CEP19Q96LK0 163 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF488Q96MN9 340 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PLEKHA1Q9HB21 404 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PSORS1C1Q9UIG5 152 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 GTF2A1LQ9UNN4 478 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 DIMT1Q9UNQ2 313 aaKnown RBP5.36□□□□□ -1.55
SLIRP-203ENST00000554074 SLC7A11Q9UPY5 501 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PCDHGB5Q9Y5G0 923 aa5.36□□□□□ -1.55
SLIRP-203ENST00000554074 PRKDCP78527 4128 aaKnown RBP5.35□□□□□ -1.55
SLIRP-203ENST00000554074 IGKV1-27A0A075B6S5 117 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 TRBV2A0A0J9YWF9 115 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 MEGF11A6BM72 1044 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 RPP14O95059 124 aaKnown RBP5.35□□□□□ -1.55
SLIRP-203ENST00000554074 CLIC3O95833 236 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 SERPINA3P01011 423 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ISG15P05161 165 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 GNAO1P09471 354 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 UBCP0CG48 685 aaKnown RBP5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF728P0DKX0 622 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 IGHV1-8P0DP01 117 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 CCL3L1P16619 93 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 CEBPDP49716 269 aaPredicted RBP5.35□□□□□ -1.55
SLIRP-203ENST00000554074 CCR9P51686 369 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 BMXP51813 675 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 TAS2R43P59537 309 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 COL10A1Q03692 680 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF146Q15072 292 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 CNN3Q15417 329 aaKnown RBP5.35□□□□□ -1.55
SLIRP-203ENST00000554074 MINOS1Q5TGZ0 78 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF626Q68DY1 528 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 UTS2BQ765I0 119 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 GDPD3Q7L5L3 318 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ANGPTL5Q86XS5 388 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 Q8N2B8 174 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ASCC1Q8N9N2 400 aaKnown RBP5.35□□□□□ -1.55
SLIRP-203ENST00000554074 OR4M1Q8NGD0 313 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 OR52I1Q8NGK6 324 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 OR13D1Q8NGV5 346 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 OR52N1Q8NH53 320 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 CNIH3Q8TBE1 160 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 RPS4Y2Q8TD47 263 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 GGHQ92820 318 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 BORCS8Q96FH0 119 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms