RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 FAM90A18PA6NE21 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A16PA6NEW6 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A20PA6NIJ5 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A9PA6NNJ1 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A12PA8MX19 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A5PA8MXJ8 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 A8MZ25 164 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 LEUTXA8MZ59 168 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ZNF878C9JN71 531 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ZNF593O00488 134 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ANGPT2O15123 496 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 IDH3BO43837 385 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 LY6G6CO95867 125 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 IGHG2P01859 326 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 APOC1P02654 83 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ELANEP08246 267 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A15PP0C7V4 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A13PP0C7W8 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A14PP0C7W9 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM90A24PP0C7X0 464 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 IGHV4-30-4P0DP06 118 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 PYCR1P32322 319 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ZNF121P58317 390 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 MEF2CQ06413 473 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 EIF2B1Q14232 305 aaKnown RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 GFOD2Q3B7J2 385 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 CXorf66Q5JRM2 361 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FGD3Q5JSP0 725 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 TEX30Q5JUR7 227 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ERICH5Q6P6B1 374 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 HAGHLQ6PII5 290 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 TCF23Q7RTU1 214 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 VTCN1Q7Z7D3 282 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 RTN4RL2Q86UN3 420 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ABHD12Q8N2K0 398 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAM71E2Q8N5Q1 922 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 OR11H1Q8NG94 326 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 OR5A2Q8NGI9 324 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 TSPEARQ8WU66 669 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 C4orf3Q8WVX3 66 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ZNRF4Q8WWF5 429 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ANP32BQ92688 251 aaKnown RBP5.31□□□□□ -1.56
ATXN3-224ENST00000554040 PGAM5Q96HS1 289 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 ZNF488Q96MN9 340 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 SH3GL1Q99961 368 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 NRIP2Q9BQI9 281 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 TMEM120AQ9BXJ8 343 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 VIPAS39Q9H9C1 493 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 OR14J1Q9UGF5 321 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 HERC1Q15751 4861 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 DNAH17Q9UFH2 4485 aa5.31□□□□□ -1.56
ATXN3-224ENST00000554040 A0A1W2PRQ8 180 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 hADV38S2A0JD32 116 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 DHRS12A0PJE2 317 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 ARRDC5A6NEK1 342 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 LINC01548A6NM66 108 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 LY6LH3BQJ8 138 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 FGF16O43320 207 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 NOS1APO75052 506 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-224ENST00000554040 TMEM127O75204 238 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 ZNF737O75373 536 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 MMP23AO75900 390 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 SPARCP09486 303 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 HSD11B1P28845 292 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 SLC6A6P31641 620 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 MNDAP41218 407 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 EDDM3BP56851 147 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATXN3-224ENST00000554040 GPR50Q13585 617 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 CYLC2Q14093 348 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-224ENST00000554040 DGCR6Q14129 220 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 TRIM25Q14258 630 aaKnown RBP5.3□□□□□ -1.56
ATXN3-224ENST00000554040 HAGHQ16775 308 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 CEACAM21Q3KPI0 293 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 CEP78Q5JTW2 689 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 CCDC144NLQ6NUI1 221 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 GDPD3Q7L5L3 318 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 SLC35E3Q7Z769 313 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 FOXRED2Q8IWF2 684 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 PROKR2Q8NFJ6 384 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 OR8J3Q8NGG0 315 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 OR51L1Q8NGJ5 315 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 ZNF596Q8TC21 504 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 ST6GALNAC6Q969X2 333 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 CREB3L1Q96BA8 519 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 IFT27Q9BW83 186 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 OR52D1Q9H346 318 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 ISYNA1Q9NPH2 558 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 DNAJC27Q9NZQ0 273 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 CD300AQ9UGN4 299 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 SLC22A13Q9Y226 551 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 COMMD3-BMI1R4GMX3 469 aa5.3□□□□□ -1.56
ATXN3-224ENST00000554040 MUC4Q99102 2169 aa5.29□□□□□ -1.56
ATXN3-224ENST00000554040 TMEM120BA0PK00 339 aa5.29□□□□□ -1.56
ATXN3-224ENST00000554040 GAGE12BA1L429 117 aa5.29□□□□□ -1.56
ATXN3-224ENST00000554040 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
ATXN3-224ENST00000554040 OR5B21A6NL26 309 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms