RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 C1orf174Q8IYL3 243 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 FTMTQ8N4E7 242 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF680Q8NEM1 530 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 C1orf162Q8NEQ5 155 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 OR5D18Q8NGL1 313 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 OR10K1Q8NGX5 313 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 OR13G1Q8NGZ3 307 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 NPRL2Q8WTW4 380 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 RTBDNQ9BSG5 229 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ST6GALNAC5Q9BVH7 336 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 NMES1Q9C002 83 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 PKIBQ9C010 78 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 PPA2Q9H2U2 334 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 PLK3Q9H4B4 646 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 C5orf66Q9H5L9 145 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ANXA10Q9UJ72 324 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ST3GAL6Q9Y274 331 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 NOP16Q9Y3C1 178 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 CSAG2Q9Y5P2 127 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 AUP1Q9Y679 476 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 TTC28Q96AY4 2481 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 CNOT1A5YKK6 2376 aaKnown RBP5.15□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM186AA6NE01 2351 aa5.15□□□□□ -1.58
VIPAS39-204ENST00000553576 TRBV6-7A0A0A0MS04 114 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 TRAV14DV4A0A0A6YYC5 116 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 TRBV6-6A0A0A6YYG2 114 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 A0A0D9SG52 128 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR5H14A6NHG9 310 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR5B21A6NL26 309 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CD300LBA8K4G0 201 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 L7N2F9 121 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 GOSR2O14653 212 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 TMPRSS2O15393 492 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ANGPTL7O43827 346 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 SFT2D2O95562 160 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 MPC2O95563 127 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 HLA-AP01891 365 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CSN2P05814 226 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CRHP06850 196 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 SFTPBP07988 381 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 RPS2P15880 293 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CBR1P16152 277 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CXCL2P19875 107 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 COX5AP20674 150 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 IGHV1-2P23083 117 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 GABRR1P24046 479 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 S100A11P31949 105 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 WNT5AP41221 380 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF81P51508 661 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 NOVA1P51513 510 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 FGF12P61328 243 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 PRDX4Q13162 271 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 MRPL49Q13405 166 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF345Q14585 488 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF169Q14929 603 aaPredicted RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 DAZAP2Q15038 168 aaPredicted RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 GABRA6Q16445 453 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 TAF9Q16594 264 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 MPV17LQ2QL34 196 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 DEFB109BQ30KR1 87 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CHRFAM7AQ494W8 412 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 C9orf135Q5VTT2 229 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 DCAF12L2Q5VW00 463 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 PLCXD3Q63HM9 321 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 LIN54Q6MZP7 749 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 RFPL4BQ6ZWI9 263 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 MRPL21Q7Z2W9 205 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 P4HA3Q7Z4N8 544 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 TMED4Q7Z7H5 227 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 MDP1Q86V88 176 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CALHM1Q8IU99 346 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ZDHHC23Q8IYP9 409 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 FBXL14Q8N1E6 418 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ZADH2Q8N4Q0 377 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF611Q8N823 705 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM169BQ8N8A8 192 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ADAD2Q8NCV1 583 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR10AD1Q8NGE0 317 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR8H1Q8NGG4 311 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR56B2PQ8NGI1 322 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR6K3Q8NGY3 331 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 MARCH1Q8TCQ1 289 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 HPSE2Q8WWQ2 592 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OR5P3Q8WZ94 311 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM230Q96A57 120 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 WDR89Q96FK6 387 aaPredicted RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 KIRREL1Q96J84 757 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CMSS1Q9BQ75 279 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 SULT4A1Q9BR01 284 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 LRFN3Q9BTN0 628 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 FAAP24Q9BTP7 215 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 CHIAQ9BZP6 476 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 FGF23Q9GZV9 251 aaPredicted RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 IFT22Q9H7X7 185 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 ELL3Q9HB65 397 aaPredicted RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 RAB18Q9NP72 206 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 OBP2BQ9NPH6 170 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 RCC2Q9P258 522 aaKnown RBP5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 AK3Q9UIJ7 227 aa5.15□□□□□ -1.59
VIPAS39-204ENST00000553576 EP300Q09472 2414 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms