RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZNF649Q9BS31 505 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 SLC25A33Q9BSK2 321 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 C1orf21Q9H246 121 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 VIPAS39Q9H9C1 493 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 FGFR1OP2Q9NVK5 253 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-219ENST00000553488 KLHDC2Q9Y2U9 406 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 LYVE1Q9Y5Y7 322 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 DNAH10Q8IVF4 4471 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 A0A0U1RQV5 110 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 FAM183AA6NL82 134 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 SELENOFO60613 162 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 MMP23AO75900 390 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 FABP3P05413 133 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 LYNP07948 512 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 H2BFMP0C1H6 154 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 CD24P25063 80 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 NUDT2P50583 147 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 LUMP51884 338 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-219ENST00000553488 ERVK11-1P61568 191 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 DYNC1I2Q13409 638 aaKnown RBP5.74□□□□□ -1.49
ATXN3-219ENST00000553488 PLCXD3Q63HM9 321 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 TMEM42Q69YG0 159 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 SHFQ7M4L6 423 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 EGFL6Q8IUX8 553 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 BATF2Q8N1L9 274 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 OR2T33Q8NG76 320 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 OTOSQ8NHW6 89 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 NDNFQ8TB73 568 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 FAM81AQ8TBF8 368 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 TFAP2CQ92754 450 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 PYURFQ96I23 114 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 AKR1E2Q96JD6 320 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 RBM14Q96PK6 669 aaKnown RBP5.74□□□□□ -1.49
ATXN3-219ENST00000553488 HIST1H2AAQ96QV6 131 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 PRR25Q96S07 402 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 ASCL2Q99929 193 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 TSSK6Q9BXA6 273 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 NIPAL2Q9H841 368 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 GORASP2Q9H8Y8 452 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 MED20Q9H944 212 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 CMC2Q9NRP2 79 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 ARMC1Q9NVT9 282 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 FAM206AQ9NX38 181 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 VNN3Q9NY84 501 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 OR14J1Q9UGF5 321 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 HHLA2Q9UM44 414 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 BAIAP2Q9UQB8 552 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 SESN1Q9Y6P5 492 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
ATXN3-219ENST00000553488 PQLC2LA1A4F0 135 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 PSMB11A5LHX3 300 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 PRR32B1ATL7 298 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 NDUFAB1O14561 156 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 RAMP3O60896 148 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 NXPH2O95156 264 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 SOX14O95416 240 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 GASTP01350 101 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF3P17036 446 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 HTR1DP28221 377 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 CHATP28329 748 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 SLC6A1P30531 599 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 MYCNOSP40205 109 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 HAAOP46952 286 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 HMGA2P52926 109 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 EDDM3BP56851 147 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 PSME3P61289 254 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 MEF2CQ06413 473 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-219ENST00000553488 IL18R1Q13478 541 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 BAIAP2L2Q6UXY1 529 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 MOB3CQ70IA8 216 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF329Q86UD4 541 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 OR8H2Q8N162 312 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 RNF148Q8N7C7 305 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF676Q8N7Q3 588 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 ASCC1Q8N9N2 400 aaKnown RBP5.73□□□□□ -1.49
ATXN3-219ENST00000553488 BCAS4Q8TDM0 211 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 ITFG2Q969R8 447 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 CLEC7AQ9BXN2 247 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 TMEM133Q9H2Q1 129 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 SPAG4Q9NPE6 437 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 IL1RAPQ9NPH3 570 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 GPR84Q9NQS5 396 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 TAS2R1Q9NYW7 299 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 SLC22A13Q9Y226 551 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 POLDIP2Q9Y2S7 368 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 LINC00312Q9Y6C7 94 aa5.73□□□□□ -1.49
ATXN3-219ENST00000553488 RIIAD1A6NNX1 92 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 F8VVB4 439 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 F8VWA3 439 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 DHRS3O75911 302 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 IFNGP01579 166 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 IGLV1-47P01700 117 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 SNRNP70P08621 437 aaKnown RBP5.72□□□□□ -1.49
ATXN3-219ENST00000553488 ATP6V1B1P15313 513 aa5.72□□□□□ -1.49
ATXN3-219ENST00000553488 MAGEA2P43356 314 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms