RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 PIPP12273 146 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-207ENST00000553290 BCL3P20749 454 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 PEX2P28328 305 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 NPBWR2P48146 333 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 GBX2P52951 348 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-207ENST00000553290 DLX6P56179 175 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF146Q15072 292 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 AANATQ16613 207 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 LPCAT4Q643R3 524 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 OR51A4Q8NGJ6 313 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 OR10AC1Q8NH08 325 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 OR5AK2Q8NH90 309 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 SSX3Q99909 188 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF649Q9BS31 505 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 COMMD4Q9H0A8 199 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 C16orf95Q9H693 158 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 ISG20L2Q9H9L3 353 aaKnown RBP10.55□□□□□ -0.72
ACTN1-207ENST00000553290 RHOFQ9HBH0 211 aa10.55□□□□□ -0.72
ACTN1-207ENST00000553290 RBFOX1Q9NWB1 397 aaKnown RBP10.55□□□□□ -0.72
ACTN1-207ENST00000553290 hADV38S2A0JD32 116 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 H3BUX3 64 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 TSPAN9O75954 239 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 CLPXO76031 633 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 ALX3O95076 343 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 PRKACAP17612 351 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 GABRR1P24046 479 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 LRRC75BQ2VPJ9 315 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 Q6ZSV7 163 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 SERPINA12Q8IW75 414 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 OR52I1Q8NGK6 324 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 OR5D14Q8NGL3 314 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 OR13C9Q8NGT0 318 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 OR13D1Q8NGV5 346 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 PPP1R35Q8TAP8 253 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 C17orf50Q8WW18 174 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 AJUBAQ96IF1 538 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 CITED1Q99966 193 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 JAM3Q9BX67 310 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 HMG20AQ9NP66 347 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 FGF20Q9NP95 211 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-207ENST00000553290 IL36RNQ9UBH0 155 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 PCDHGB5Q9Y5G0 923 aa10.54□□□□□ -0.72
ACTN1-207ENST00000553290 TMEM82A0PJX8 343 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 SH2D1BO14796 132 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 MGST3O14880 152 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 KDM4BO94953 1096 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 ZFPL1O95159 310 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 COX7A1P24310 79 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 BMXP51813 675 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 PROK1P58294 105 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 EDDM3AQ14507 147 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 GRK1Q15835 563 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF782Q6ZMW2 699 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-207ENST00000553290 PARP16Q8N5Y8 322 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 RFT1Q96AA3 541 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 C8orf4Q9NR00 106 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 DHDHQ9UQ10 334 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 LINC00312Q9Y6C7 94 aa10.53□□□□□ -0.72
ACTN1-207ENST00000553290 TRRAPQ9Y4A5 3859 aa10.52□□□□□ -0.72
ACTN1-207ENST00000553290 IRGMA1A4Y4 181 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 E9PI62 339 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 TIMM23O14925 209 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 SULT1B1O43704 296 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 PSPNO60542 156 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 WBP4O75554 376 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 HCKP08631 526 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 LIMS3P0CW19 117 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 LIMS4P0CW20 117 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 IGHV1-8P0DP01 117 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 DCKP27707 260 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 DUSP1P28562 367 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 ERP29P30040 261 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 SNU13P55769 128 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 SRSF4Q08170 494 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 CCDC58Q4VC31 144 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 TTC23Q5W5X9 447 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 TREML4Q6UXN2 200 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 PACRGLQ8N7B6 248 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 OR11H6Q8NGC7 330 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 OR52N4Q8NGI2 321 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 TSEN15Q8WW01 171 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 CPNE2Q96FN4 548 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 SPACA5Q96QH8 159 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 CHST6Q9GZX3 395 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 RAB18Q9NP72 206 aa10.52□□□□□ -0.73
ACTN1-207ENST00000553290 EXOSC4Q9NPD3 245 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 TBL2Q9Y4P3 447 aaKnown RBP10.52□□□□□ -0.73
ACTN1-207ENST00000553290 IGKV1-12A0A0C4DH73 117 aa10.51□□□□□ -0.73
ACTN1-207ENST00000553290 FUOMA2VDF0 154 aa10.51□□□□□ -0.73
ACTN1-207ENST00000553290 VGLL3A8MV65 326 aa10.51□□□□□ -0.73
ACTN1-207ENST00000553290 ODF3BA8MYP8 253 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms