RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 MKXQ8IYA7 352 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 SAXO1Q8IYX7 474 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 FAM58AQ8N1B3 248 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 PNKDQ8N490 385 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 Q8NFD4 153 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 RFT1Q96AA3 541 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 COMMD4Q9H0A8 199 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 DSCAML1Q8TD84 2053 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 C17orf98A8MV24 154 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 HAND1O96004 215 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 LMO1P25800 156 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 POU3F4P49335 361 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 AQP4P55087 323 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 ERVFRD-1P60508 538 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 KISS1Q15726 138 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 RNLSQ5VYX0 342 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 ASCL4Q6XD76 172 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 TMPRSS11AQ6ZMR5 421 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 OR8H2Q8N162 312 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 ZSCAN4Q8NAM6 433 aaPredicted RBP15.74■□□□□ 0.11
PTCH1-227ENST00000553256 OR4M1Q8NGD0 313 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 OR5D14Q8NGL3 314 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 TAF15Q92804 592 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTCH1-227ENST00000553256 EMG1Q92979 244 aaKnown RBP15.74■□□□□ 0.11
PTCH1-227ENST00000553256 SNX22Q96L94 193 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 DHDHQ9UQ10 334 aa15.74■□□□□ 0.11
PTCH1-227ENST00000553256 A0A1W2PQ09 198 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 EFCAB10A6NFE3 127 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 INMTO95050 263 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 CCL3L1P16619 93 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 IGFBP3P17936 291 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-227ENST00000553256 CFPP27918 469 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 IER3P46695 156 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 AWAT1Q58HT5 328 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 SPIN3Q5JUX0 258 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 Q6P435 159 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 C16orf87Q6PH81 154 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 OR5D18Q8NGL1 313 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 OR13C5Q8NGS8 318 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 GPR148Q8TDV2 347 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 GHSRQ92847 366 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 SLC25A28Q96A46 364 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 CHIAQ9BZP6 476 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 RHOFQ9HBH0 211 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 POMT1Q9Y6A1 747 aa15.73■□□□□ 0.11
PTCH1-227ENST00000553256 NPFFO15130 113 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 GPX5O75715 221 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 ALDOBP05062 364 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 CALCBP10092 127 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 MYL12AP19105 171 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 DUSP1P28562 367 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 OR3A1P47881 315 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 CAPZA1P52907 286 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 ACTG1P63261 375 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 RELBQ01201 579 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 GUCA2AQ02747 115 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 NCR3LG1Q68D85 454 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 ELP2Q6IA86 826 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 FAM185AQ8N0U4 392 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 PXT1Q8NFP0 134 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 OR4S1Q8NGB4 309 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 C17orf50Q8WW18 174 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 GCDHQ92947 438 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-227ENST00000553256 PAK1IP1Q9NWT1 392 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-227ENST00000553256 TAS2R4Q9NYW5 299 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 ZNRD1Q9P1U0 126 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 ZNF281Q9Y2X9 895 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 CMYA5Q8N3K9 4069 aa15.72■□□□□ 0.11
PTCH1-227ENST00000553256 MEGF11A6BM72 1044 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 GABRPO00591 440 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 CD1AP06126 327 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 SOX2P48431 317 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 ACSM1Q08AH1 577 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 C6orf141Q5SZD1 244 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 LYPD6Q86Y78 171 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 NANOGP1Q8N7R0 232 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 OR5D13Q8NGL4 314 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 TBC1D15Q8TC07 691 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 SGCDQ92629 289 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 TMEM106AQ96A25 262 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 ORAI1Q96D31 301 aa15.71■□□□□ 0.11
PTCH1-227ENST00000553256 TRBV5-7A0A0A0MS05 114 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 OR2H2O95918 312 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 IGHV4-59P01825 116 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 PRKACAP17612 351 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 RAB3AP20336 220 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 ERP29P30040 261 aaKnown RBP15.7■□□□□ 0.1
PTCH1-227ENST00000553256 SAA4P35542 130 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 IRF3Q14653 427 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 TAF9Q16594 264 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 C12orf54Q6X4T0 127 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 AHSA2Q719I0 299 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 ZFP41Q8N8Y5 198 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 ASCC1Q8N9N2 400 aaKnown RBP15.7■□□□□ 0.1
PTCH1-227ENST00000553256 BPIFB6Q8NFQ5 453 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 TSEN15Q8WW01 171 aaKnown RBP15.7■□□□□ 0.1
PTCH1-227ENST00000553256 SSMEM1Q8WWF3 244 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 ZDHHC16Q969W1 377 aa15.7■□□□□ 0.1
PTCH1-227ENST00000553256 LSM2Q9Y333 95 aaKnown RBP15.7■□□□□ 0.1
PTCH1-227ENST00000553256 FAM181BA6NEQ2 426 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms