RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 GATBO75879 557 aaKnown RBP9.66□□□□□ -0.86
CKAP4-202ENST00000552828 ZFPL1O95159 310 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 PAHP00439 452 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 C21orf33P30042 268 aaPredicted RBP9.66□□□□□ -0.86
CKAP4-202ENST00000552828 GABRA5P31644 462 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 KIR2DS4P43632 304 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 EFNB2P52799 333 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 DLX1P56177 255 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 CAV3P56539 151 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 PRB3Q04118 309 aaPredicted RBP9.66□□□□□ -0.86
CKAP4-202ENST00000552828 KLRD1Q13241 179 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 SAMD5Q5TGI4 173 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 Q6ZTK2 550 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 PNKDQ8N490 385 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 OR5AK2Q8NH90 309 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 ANGPTL6Q8NI99 470 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 PPP1R35Q8TAP8 253 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 RPL3LQ92901 407 aaKnown RBP9.66□□□□□ -0.86
CKAP4-202ENST00000552828 DGCR14Q96DF8 476 aaKnown RBP9.66□□□□□ -0.86
CKAP4-202ENST00000552828 MED30Q96HR3 178 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 AJUBAQ96IF1 538 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 CNBD2Q96M20 576 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 WDR13Q9H1Z4 485 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 PPA2Q9H2U2 334 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 OR51I2Q9H344 312 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 GPR173Q9NS66 373 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 SLC7A11Q9UPY5 501 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 ERGIC3Q9Y282 383 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 MAB21L2Q9Y586 359 aa9.66□□□□□ -0.86
CKAP4-202ENST00000552828 A0A1W2PRD5 423 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 A0A1W2PRF3 423 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 A0A1W2PRM7 423 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 MYL12BO14950 172 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 SIGLEC5O15389 551 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 CDK1P06493 297 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 ACAA1P09110 424 aaPredicted RBP9.65□□□□□ -0.86
CKAP4-202ENST00000552828 SELLP14151 372 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF20P17024 532 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 CDK5R1Q15078 307 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 AANATQ16613 207 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 DGUOKQ16854 277 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 DMRTC1Q5HYR2 192 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 RNLSQ5VYX0 342 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 HCP5Q6MZN7 132 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 CRIP3Q6Q6R5 217 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF573Q86YE8 665 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 OR5T2Q8NGG2 359 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 OR13C3Q8NGS6 347 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF671Q8TAW3 534 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 PP6455Q8WZ26 134 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 FGGYQ96C11 551 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 GAFA1Q96PS6 74 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 PDCD1LG2Q9BQ51 273 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 CHST5Q9GZS9 411 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 FGF23Q9GZV9 251 aaPredicted RBP9.65□□□□□ -0.86
CKAP4-202ENST00000552828 FAM234AQ9H0X4 552 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 MEGF9Q9H1U4 602 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 DNAJB11Q9UBS4 358 aa9.65□□□□□ -0.86
CKAP4-202ENST00000552828 SLC25A10Q9UBX3 287 aaPredicted RBP9.65□□□□□ -0.86
CKAP4-202ENST00000552828 PQLC2LA1A4F0 135 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 NKX6-3A6NJ46 265 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 OGG1O15527 345 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 TFAP2AP05549 437 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 FUT6P51993 359 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 WNT4P56705 351 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 LSAMPQ13449 338 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 CNN3Q15417 329 aaKnown RBP9.64□□□□□ -0.87
CKAP4-202ENST00000552828 UBE2V2Q15819 145 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 XAF1Q6GPH4 301 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 HAGHLQ6PII5 290 aaPredicted RBP9.64□□□□□ -0.87
CKAP4-202ENST00000552828 Q6ZPA2 131 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 REC114Q7Z4M0 266 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 NANOGP1Q8N7R0 232 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 ZNF485Q8NCK3 441 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 OR51A4Q8NGJ6 313 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 OR5D13Q8NGL4 314 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 OR10AC1Q8NH08 325 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 H1FXQ92522 213 aaKnown RBP9.64□□□□□ -0.87
CKAP4-202ENST00000552828 ADAT3Q96EY9 351 aaPredicted RBP9.64□□□□□ -0.87
CKAP4-202ENST00000552828 SSX3Q99909 188 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 CDCA4Q9BXL8 241 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 DUSP21Q9H596 190 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 RANBP3Q9H6Z4 567 aaPredicted RBP9.64□□□□□ -0.87
CKAP4-202ENST00000552828 SNTG1Q9NSN8 517 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 PTTG2Q9NZH5 202 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 DHDHQ9UQ10 334 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 SIGLEC9Q9Y336 463 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 SF3B6Q9Y3B4 125 aaKnown RBP9.64□□□□□ -0.87
CKAP4-202ENST00000552828 PCDHGB5Q9Y5G0 923 aa9.64□□□□□ -0.87
CKAP4-202ENST00000552828 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 TRBV23-1A0A0A0MS06 115 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 FAM230AA0A1W2PPH8 454 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 H3BUX3 64 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 RGS10O43665 173 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 OCM2P0CE71 109 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 PRKACBP22694 351 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 HAAOP46952 286 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms