RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	NEURL2	Q9BR09	285 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	CHST6	Q9GZX3	395 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ESRP2	Q9H6T0	727 aa	Known RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	IFT22	Q9H7X7	185 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	SPACA1	Q9HBV2	294 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	KCNJ16	Q9NPI9	418 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	CA10	Q9NS85	328 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	TAAR3P	Q9P1P4	343 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	IL36RN	Q9UBH0	155 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	POU2F3	Q9UKI9	436 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ALG5	Q9Y673	324 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ATP23	Q9Y6H3	246 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ATM	Q13315	3056 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZSCAN5B	A6NJL1	495 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	ARPC1B	O15143	372 aa	Known RBP	10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	PEX14	O75381	377 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	PTBP3	O95758	552 aa	Known RBP	10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	GLA	P06280	429 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	TRAPPC2	P0DI81	140 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	TRAPPC2B	P0DI82	140 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	HRH1	P35367	487 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	RAB25	P57735	213 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	IKZF1	Q13422	519 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	PDCD1	Q15116	288 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	CARTPT	Q16568	116 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	ATAD3C	Q5T2N8	411 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	PRAMEF6	Q5VXH4	476 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	BEST4	Q8NFU0	473 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR2Z1	Q8NG97	314 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	ELMOD3	Q96FG2	381 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	SLC6A7	Q99884	636 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	PRRT1	Q99946	306 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	GINS4	Q9BRT9	223 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	HES4	Q9HCC6	221 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF701	Q9NV72	531 aa	Predicted RBP	10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	SLC2A8	Q9NY64	477 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	SCP2D1	Q9UJQ7	156 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	EDAR	Q9UNE0	448 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	PIEZO2	Q9H5I5	2752 aa		10.76	□□□□□ -0.69
CACNB3-223	ENST00000552480	UBE2QL1	A1L167	161 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	C7orf66	A4D0T2	115 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	HMX3	A6NHT5	357 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480		A6NLC8	198 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	PRAF2	O60831	178 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	NXPH2	O95156	264 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	FCGR3A	P08637	254 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	MECP2	P51608	486 aa	Known RBP	10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	TAS2R46	P59540	309 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	CDSN	Q15517	529 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	ADIPOQ	Q15848	244 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	NKPD1	Q17RQ9	610 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	MICB	Q29980	383 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	SPIN3	Q5JUX0	258 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	VAX1	Q5SQQ9	334 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	FIP1L1	Q6UN15	594 aa	Known RBP	10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	WDR82	Q6UXN9	313 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	IDO2	Q6ZQW0	420 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR5H2	Q8NGV7	314 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	PRR7	Q8TB68	274 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	PLPPR2	Q96GM1	343 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	MEGF10	Q96KG7	1140 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	ST6GALNAC5	Q9BVH7	336 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	C12orf4	Q9NQ89	552 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	FLVCR2	Q9UPI3	526 aa		10.75	□□□□□ -0.69
CACNB3-223	ENST00000552480	BOD1L1	Q8NFC6	3051 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	TLN1	Q9Y490	2541 aa	Known RBP	10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	IGHV3-64D	A0A0J9YX35	117 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	VSTM5	A8MXK1	200 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	SHISA9	B4DS77	424 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	MCRIP1	C9JLW8	97 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	PMP2	P02689	132 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	IFNA6	P05013	189 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	CSN2	P05814	226 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	CD3E	P07766	207 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR4A8	P0C604	315 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	GNLY	P22749	145 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	GRN	P28799	593 aa	Known RBP	10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF81	P51508	661 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	TFF3	Q07654	80 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF146	Q15072	292 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	MPPED2	Q15777	294 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	ADAM5	Q6NVV9	412 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480		Q6P435	159 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	BRICD5	Q6PL45	260 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF826P	Q6ZT77	177 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	AKAP14	Q86UN6	197 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	ARRDC1	Q8N5I2	433 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	SUMF2	Q8NBJ7	301 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR10Z1	Q8NGY1	313 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	LINC01560	Q8TB33	94 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	GIMAP1	Q8WWP7	306 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	MAFIP	Q8WZ33	124 aa		10.74	□□□□□ -0.69
CACNB3-223	ENST00000552480	DYRK2	Q92630	601 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms