RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MARC2Q969Z3 335 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 LRRC58Q96CX6 371 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 BIRC8Q96P09 236 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 OLFM3Q96PB7 478 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 PITX2Q99697 317 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 RNF126Q9BV68 326 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 SLC25A39Q9BZJ4 359 aaPredicted RBP3.32□□□□□ -1.88
USP44-208ENST00000552440 SELENOIQ9C0D9 397 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 RPF2Q9H7B2 306 aaKnown RBP3.32□□□□□ -1.88
USP44-208ENST00000552440 DOK5Q9P104 306 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 OPTCQ9UBM4 332 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 OR12D3Q9UGF7 316 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 CLTCQ00610 1675 aaKnown RBP3.32□□□□□ -1.88
USP44-208ENST00000552440 PRDM15P57071 1507 aaPredicted RBP3.32□□□□□ -1.88
USP44-208ENST00000552440 MAP3K1Q13233 1512 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 TTC3P53804 2025 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 UTRNP46939 3433 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 A2MP01023 1474 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 SCAF11Q99590 1463 aaKnown RBP3.32□□□□□ -1.88
USP44-208ENST00000552440 CEP152O94986 1710 aa3.32□□□□□ -1.88
USP44-208ENST00000552440 XIRP1Q702N8 1843 aaKnown RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 SHPRHQ149N8 1683 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 KIDINS220Q9ULH0 1771 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 ARHGAP5Q13017 1502 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 A0A0B4J2A0 478 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 A0A1W2PS18 150 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 PRORSD1PA6NEY8 169 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 J3QT63 122 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 GPR75O95800 540 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 RENP00797 406 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 SERPINA7P05543 415 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 IGKV5-2P06315 115 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 PRSS1P07477 247 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 ESDP10768 282 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 CYBAP13498 195 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 GZMHP20718 246 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 OR3A4PP47883 348 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 REG1BP48304 166 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 THBS3P49746 956 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 KLK7P49862 253 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 CDC42P60953 191 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 PRDX1Q06830 199 aaKnown RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 CDK10Q15131 360 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 RSU1Q15404 277 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 LAMTOR1Q6IAA8 161 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 UFSP1Q6NVU6 142 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 C9orf47Q6ZRZ4 202 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 LRRTM1Q86UE6 522 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 C9orf40Q8IXQ3 194 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 EIF4E3Q8N5X7 224 aaKnown RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 CHST4Q8NCG5 386 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 SDR42E1Q8WUS8 393 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 BLNKQ8WV28 456 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 CHCHD10Q8WYQ3 142 aaPredicted RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 TAMM41Q96BW9 452 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 CNRIP1Q96F85 164 aaPredicted RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 BTN2A3PQ96KV6 586 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 RDH12Q96NR8 316 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 PFDN5Q99471 154 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 ARHGDIGQ99819 225 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 SULT4A1Q9BR01 284 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 MROQ9BYG7 248 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 C20orf85Q9H1P6 137 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 RGS18Q9NS28 235 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 TAS2R5Q9NYW4 299 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 TAS2R1Q9NYW7 299 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 SHPKQ9UHJ6 478 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 DKKL1Q9UK85 242 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 RARRES3Q9UL19 164 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 ANGPT4Q9Y264 503 aa3.31□□□□□ -1.88
USP44-208ENST00000552440 TDRD15B5MCY1 1934 aaKnown RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 AHDC1Q5TGY3 1603 aaPredicted RBP3.31□□□□□ -1.88
USP44-208ENST00000552440 IGHV4OR15-8A0A075B7B6 117 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 IGLV1-36A0A0B4J1U3 117 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 IGHV3-38A0A0C4DH36 116 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 A0A0G2JRQ6 117 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 C12orf77C9JDV5 145 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 F8W036 122 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ATG12O94817 140 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MT-CO2P00403 227 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MOSP00540 346 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 EIF4EP06730 217 aaKnown RBP3.3□□□□□ -1.88
USP44-208ENST00000552440 CRYGDP07320 174 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 IL3P08700 152 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 CT45A10P0DMU9 189 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR13C7P0DN81 318 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 T-ENOLP0DO92 83 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 IFI30P13284 250 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 ATF1P18846 271 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OMGP23515 440 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MYL9P24844 172 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 CXCR1P25024 350 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 PAX6P26367 422 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 SLC6A1P30531 599 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 KIR2DS2P43631 304 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 OR1E2P47887 323 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 GZMMP51124 257 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 MTPNP58546 118 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 LINC00205P59089 165 aa3.3□□□□□ -1.88
USP44-208ENST00000552440 RAB2AP61019 212 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms