RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 SPG11Q96JI7 2443 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PPIAL4EA0A075B759 164 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 A0A0A6YYD4 124 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 TRAV38-1A0A0B4J264 116 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 OOEPA6NGQ2 149 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 VWC2LB2RUY7 222 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PPIAL4DF5H284 164 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 CTDSPLO15194 276 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 NXPH2O95156 264 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 HTR3BO95264 441 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 CSN2P05814 226 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 INHBBP09529 407 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PPIAL4FP0DN26 164 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PSG2P11465 335 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 EGR1P18146 543 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 ELK1P19419 428 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 AMY2BP19961 511 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 SERPINA2P20848 420 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 TNFSF8P32971 234 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 NR4A2P43354 598 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 KCNJ3P48549 501 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PTH2RP49190 550 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 EFNB2P52799 333 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 DSCR9P59020 149 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PLA2G7Q13093 441 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 KCNJ8Q15842 424 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 MICBQ29980 383 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 ZNF260Q3ZCT1 412 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 OR10K2Q6IF99 312 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 FIP1L1Q6UN15 594 aaKnown RBP8.02□□□□□ -1.13
LIMA1-211ENST00000552338 BAIAP2L2Q6UXY1 529 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 ZNF788Q6ZQV5 615 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 CMTM4Q8IZR5 234 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 GAPTQ8N292 157 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 SAMD12Q8N8I0 201 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 OR56B1Q8NGI3 324 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 C15orf40Q8WUR7 153 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 FAM46BQ96A09 425 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 S100A16Q96FQ6 103 aaKnown RBP8.02□□□□□ -1.13
LIMA1-211ENST00000552338 FAM234AQ9H0X4 552 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 WDR13Q9H1Z4 485 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 SPACA1Q9HBV2 294 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PLA2G2EQ9NZK7 142 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 NLKQ9UBE8 527 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 COMMD3Q9UBI1 195 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 PPIAL4AQ9Y536 164 aa8.02□□□□□ -1.13
LIMA1-211ENST00000552338 IGKV1D-17A0A075B6S4 117 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 hCG_1807616A0A1W2PRN6 198 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 OR2AT4A6NND4 320 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 CLDN25C9JDP6 229 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 MFNGO00587 321 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 SH2D1BO14796 132 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 GEMIN2O14893 280 aaKnown RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 WNT9BO14905 357 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 HPGDSO60760 199 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 NDUFS7O75251 213 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 ZNF737O75373 536 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 CRTAPO75718 401 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 MPIG6BO95866 241 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 CYB5R3P00387 301 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 HLA-DQB1P01920 261 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 EIF4EP06730 217 aaKnown RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 PRKACAP17612 351 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 FUT3P21217 361 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 CHATP28329 748 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 S100A5P33763 92 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 BTG1P62324 171 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 ZNF45Q02386 682 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 LSAMPQ13449 338 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 LAX1Q8IWV1 398 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 MUC20Q8N307 709 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 ZNF561Q8N587 486 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 OR10K1Q8NGX5 313 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 OR10R2Q8NGX6 335 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 ST8SIA4Q92187 359 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 CCL17Q92583 94 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 EMG1Q92979 244 aaKnown RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 ZDHHC16Q969W1 377 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 SNX22Q96L94 193 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 DMRTB1Q96MA1 342 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 ZNF488Q96MN9 340 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 SELENOIQ9C0D9 397 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 C6orf62Q9GZU0 229 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-211ENST00000552338 KCNK15Q9H427 330 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 BANF2Q9H503 90 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 DIABLOQ9NR28 239 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 DCAF16Q9NXF7 216 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 GLS2Q9UI32 602 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 WIPI2Q9Y4P8 454 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 CACNG2Q9Y698 323 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 DCHS2Q6V1P9 2916 aa8.01□□□□□ -1.13
LIMA1-211ENST00000552338 PRRC2AP48634 2157 aaKnown RBP8□□□□□ -1.13
LIMA1-211ENST00000552338 TRBV6-6A0A0A6YYG2 114 aa8□□□□□ -1.13
LIMA1-211ENST00000552338 TRAV24A0A0B4J272 114 aa8□□□□□ -1.13
LIMA1-211ENST00000552338 IGHV3-64DA0A0J9YX35 117 aa8□□□□□ -1.13
LIMA1-211ENST00000552338 RFPL4AA6NLU0 287 aa8□□□□□ -1.13
LIMA1-211ENST00000552338 SERPINE3A8MV23 424 aa8□□□□□ -1.13
LIMA1-211ENST00000552338 F5H0A9 414 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms