RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ZNF251Q9BRH9 671 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 UCK2Q9BZX2 261 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 MYEF2Q9P2K5 600 aaKnown RBP3.79□□□□□ -1.8
CPSF6-206ENST00000550987 CLEC2DQ9UHP7 191 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF256Q9Y2P7 627 aaPredicted RBP3.79□□□□□ -1.8
CPSF6-206ENST00000550987 HEBP2Q9Y5Z4 205 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 SAR1BQ9Y6B6 198 aa3.79□□□□□ -1.8
CPSF6-206ENST00000550987 PTPRJQ12913 1337 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 IGKV1D-13A0A0B4J2D9 117 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 A0A1B0GVI7 797 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 ARGFXA6NJG6 315 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 GJE1A6NN92 205 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 ANKRD63C9JTQ0 380 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 XKRYO14609 159 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 EMC8O43402 210 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 FCN3O75636 299 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 RAB3DO95716 219 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 IFNW1P05000 195 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 KRT16P08779 473 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 IGKV1-13P0DP09 117 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 ACTR1BP42025 376 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 SERPINB9P50453 376 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 UBE2G2P60604 165 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 RPS21P63220 83 aaKnown RBP3.78□□□□□ -1.8
CPSF6-206ENST00000550987 MED21Q13503 144 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 HERPUD1Q15011 391 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 RFX4Q33E94 735 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 COA6Q5JTJ3 125 aaKnown RBP3.78□□□□□ -1.8
CPSF6-206ENST00000550987 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM215Q68D42 235 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 MBOAT1Q6ZNC8 495 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 RFLNAQ6ZTI6 216 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 MRPL21Q7Z2W9 205 aaKnown RBP3.78□□□□□ -1.8
CPSF6-206ENST00000550987 PID1Q7Z2X4 250 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 ARHGAP18Q8N392 663 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 SLC25A45Q8N413 288 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 TBC1D19Q8N5T2 526 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 FAM86B1Q8N7N1 296 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 FBXO36Q8NEA4 188 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 C19orf18Q8NEA5 215 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 OR10G9Q8NGN4 311 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 OR10R2Q8NGX6 335 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 CACNG8Q8WXS5 425 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 IL22RA2Q969J5 263 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 TIPINQ9BVW5 301 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 GABARAPL3Q9BY60 117 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 LHX5Q9H2C1 402 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 SLC38A1Q9H2H9 487 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 SLC40A1Q9NP59 571 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 AGPAT4Q9NRZ5 378 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 SLC17A7Q9P2U7 560 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 PAIP2BQ9ULR5 123 aaKnown RBP3.78□□□□□ -1.8
CPSF6-206ENST00000550987 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
CPSF6-206ENST00000550987 TDRD6O60522 2096 aaKnown RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 A0A1W2PRD5 423 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CIB4A0PJX0 185 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 PSMB11A5LHX3 300 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 PGRMC1O00264 195 aaKnown RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 DPM1O60762 260 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CLDN11O75508 207 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 LSM8O95777 96 aaKnown RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 AIFM1O95831 613 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 ACTL6AO96019 429 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CST4P01036 141 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 HLA-HP01893 362 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 RPN2P04844 631 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 IFNA6P05013 189 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 ZDHHC11BP0C7U3 371 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CTRB1P17538 263 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CNR1P21554 472 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 SYT1P21579 422 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 AQP2P41181 271 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 KIR3DL2P43630 455 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 RAP1GDS1P52306 607 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CRISP1P54107 249 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 PSMD4P55036 377 aaKnown RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 AP3S2P59780 193 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 ARF6P62330 175 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 TFAMQ00059 246 aaKnown RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 PITPNAQ00169 270 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 SLAMF1Q13291 335 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 TMED2Q15363 201 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 IL17AQ16552 155 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 KCTD19Q17RG1 926 aaPredicted RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 C5orf47Q569G3 176 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CTRB2Q6GPI1 263 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 FRMPD2BQ6IN97 320 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 ULK3Q6PHR2 472 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 H2AFVQ71UI9 128 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 MREGQ8N565 214 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 DCAF4L2Q8NA75 395 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 INO80EQ8NBZ0 244 aaPredicted RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 OR6Q1Q8NGQ2 317 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 TMEM239Q8WW34 195 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 RXFP2Q8WXD0 754 aa3.77□□□□□ -1.81
CPSF6-206ENST00000550987 CPNE4Q96A23 557 aaPredicted RBP3.77□□□□□ -1.81
CPSF6-206ENST00000550987 OPALINQ96PE5 141 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms