RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 DNAJB9Q9UBS3 223 aa3.96□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF69Q9UC07 566 aa3.96□□□□□ -1.78
SCAF11-214ENST00000550893 AASSQ9UDR5 926 aa3.96□□□□□ -1.78
SCAF11-214ENST00000550893 TMCC3Q9ULS5 477 aa3.96□□□□□ -1.78
SCAF11-214ENST00000550893 RHBDD3Q9Y3P4 386 aa3.96□□□□□ -1.78
SCAF11-214ENST00000550893 FAM32AQ9Y421 112 aaKnown RBP3.96□□□□□ -1.78
SCAF11-214ENST00000550893 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 IGKV1-27A0A075B6S5 117 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 IGHV2-70DA0A0C4DH43 119 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 A0A1W2PS18 150 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 RNF212BA8MTL3 300 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF878C9JN71 531 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 F8VVB4 439 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 F8VWA3 439 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 LDLRAD4O15165 306 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 ENTPD5O75356 428 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 RHBDL1O75783 438 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 RENP00797 406 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 TTRP02766 147 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 SFTPBP07988 381 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 SPARCP09486 303 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 GSTM3P21266 225 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 GCH1P30793 250 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 KIR3DL2P43630 455 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 CX3CR1P49238 355 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 CRISP1P54107 249 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 KRTAP10-3P60369 221 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 VAMP2P63027 116 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 PRB3Q04118 309 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 GK3PQ14409 553 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 PTGES3Q15185 160 aaKnown RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 DNAL1Q4LDG9 190 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 FAM98BQ52LJ0 330 aaKnown RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 WDR25Q64LD2 544 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 STUMQ69YW2 141 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 LAIR2Q6ISS4 152 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 DNM1P34Q6PK57 102 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 DRAM2Q6UX65 266 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 HAPLN4Q86UW8 402 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 ERI1Q8IV48 349 aaKnown RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 C1orf174Q8IYL3 243 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 C1orf87Q8N0U7 546 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 LINC00471Q8N535 108 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 C11orf42Q8N5U0 333 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 Q8N7P7 452 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF540Q8NDQ6 660 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 OR6N2Q8NGY6 317 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 OR2T4Q8NH00 348 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 OR51F2Q8NH61 342 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 C22orf15Q8WYQ4 148 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 TNFRSF14Q92956 283 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 MCUR1Q96AQ8 359 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 UPRTQ96BW1 309 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 INTS14Q96SY0 518 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 PITX2Q99697 317 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 PKP2Q99959 881 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 ADAT1Q9BUB4 502 aaKnown RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 BEX2Q9BXY8 128 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 UFSP2Q9NUQ7 469 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 PPP1R14DQ9NXH3 145 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 MRM2Q9UI43 246 aaKnown RBP3.95□□□□□ -1.78
SCAF11-214ENST00000550893 BAIAP2Q9UQB8 552 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 PPP1R3CQ9UQK1 317 aa3.95□□□□□ -1.78
SCAF11-214ENST00000550893 IGKV1D-17A0A075B6S4 117 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 IGHV3OR15-7A0A075B7D8 119 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 IGHV3OR16-10A0A075B7F0 116 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 SRRM5B3KS81 715 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 TSPAN4O14817 238 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 MRPL3P09001 348 aaKnown RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF3P17036 446 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 CCL1P22362 96 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 TUBG1P23258 451 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 BDKRB2P30411 391 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 FMO3P31513 532 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 IFNA8P32881 189 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 CFHR2P36980 270 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 MDH2P40926 338 aaKnown RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 GLIPR1P48060 266 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 UBA52P62987 128 aaKnown RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF85Q03923 595 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 ECH1Q13011 328 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 APOFQ13790 326 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 EIF2B1Q14232 305 aaKnown RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 DGUOKQ16854 277 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 HFEQ30201 348 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 WDR38Q5JTN6 314 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 UTF1Q5T230 341 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 SLC27A4Q6P1M0 643 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 SPATA24Q86W54 205 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 PRSS35Q8N3Z0 413 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 FAM216BQ8N7L0 139 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 SIGLECL1Q8N7X8 197 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 LY6G5BQ8NDX9 201 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OR1M1Q8NGA1 313 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OR52L1Q8NGH7 329 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OR6K6Q8NGW6 343 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OR13G1Q8NGZ3 307 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OR10AC1Q8NH08 325 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 TEX47Q8TBZ9 253 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms