RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 LYPD6Q86Y78 171 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 CLVS1Q8IUQ0 354 aaPredicted RBP11.1□□□□□ -0.63
NUP188-211ENST00000550219 OR8S1Q8NH09 359 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 KCTD7Q96MP8 289 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 HIST1H2AAQ96QV6 131 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 MICU1Q9BPX6 476 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 RNF167Q9H6Y7 350 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 SLC7A11Q9UPY5 501 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 TRAV38-1A0A0B4J264 116 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 MEGF11A6BM72 1044 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 DPPA5A6NC42 116 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 FAM181BA6NEQ2 426 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 TMEM210A6NLX4 147 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 SRRM5B3KS81 715 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 CRYBA1P05813 215 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 AZGP1P25311 298 aaKnown RBP11.09□□□□□ -0.63
NUP188-211ENST00000550219 BDKRB2P30411 391 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 MTNR1BP49286 362 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 GNG3P63215 75 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 MZT1Q08AG7 82 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 METTL11BQ5VVY1 283 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 CD276Q5ZPR3 534 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 CRIP3Q6Q6R5 217 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 FIP1L1Q6UN15 594 aaKnown RBP11.09□□□□□ -0.63
NUP188-211ENST00000550219 WDR86Q86TI4 376 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 CDH26Q8IXH8 852 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 RAB2BQ8WUD1 216 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 ST8SIA4Q92187 359 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 RNF170Q96K19 258 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 TBX15Q96SF7 602 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 RTL8AQ9BWD3 113 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 NEK6Q9HC98 313 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 TCF7L1Q9HCS4 588 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 TMEM138Q9NPI0 162 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 C14orf119Q9NWQ9 140 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
NUP188-211ENST00000550219 IGKV1-27A0A075B6S5 117 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 POM121CA8CG34 1229 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 ZNF732B4DXR9 585 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 KNG1P01042 644 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 RAG2P55895 527 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 NCS1P62166 190 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 LHFPL2Q6ZUX7 228 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 PDZD9Q8IXQ8 264 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 GCSAMQ8N6F7 178 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 PNLDC1Q8NA58 520 aaKnown RBP11.08□□□□□ -0.64
NUP188-211ENST00000550219 SCCPDHQ8NBX0 429 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 OR52N4Q8NGI2 321 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 LRRC29Q8WV35 223 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 LHX4Q969G2 390 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 WDFY2Q96P53 400 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 GFI1Q99684 422 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 SLITRK2Q9H156 845 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 TLNRD1Q9H1K6 362 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 OR51I2Q9H344 312 aa11.08□□□□□ -0.64
NUP188-211ENST00000550219 A0A1B0GW55 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 A6NHS1 94 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 ZNF701M0R085 212 aaPredicted RBP11.07□□□□□ -0.64
NUP188-211ENST00000550219 DVL1O14640 695 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 MAS1P04201 325 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 MELTFP08582 738 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L2P0CJ85 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L3P0CJ86 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L4P0CJ87 422 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L5P0CJ88 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L6P0CJ89 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L7P0CJ90 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 MMP9P14780 707 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 MYL9P24844 172 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 TGFBR1P36897 503 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 RBP2P50120 134 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 GPM6AP51674 278 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 ATP1B3P54709 279 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 GMFBP60983 142 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 VBP1P61758 197 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 LSM3P62310 102 aaKnown RBP11.07□□□□□ -0.64
NUP188-211ENST00000550219 ARF6P62330 175 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 SRSF4Q08170 494 aaKnown RBP11.07□□□□□ -0.64
NUP188-211ENST00000550219 DDI2Q5TDH0 399 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4L9Q6RFH8 374 aaPredicted RBP11.07□□□□□ -0.64
NUP188-211ENST00000550219 C17orf107Q6ZR85 190 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 BTN2A1Q7KYR7 527 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 RNF144BQ7Z419 303 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 C11orf53Q8IXP5 236 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 KIR3DL3Q8N743 410 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 NKAIN3Q8N8D7 197 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 ISOC1Q96CN7 298 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 BORCS8Q96FH0 119 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 DUX4Q9UBX2 424 aa11.07□□□□□ -0.64
NUP188-211ENST00000550219 A0A0G2JK05 382 aa11.06□□□□□ -0.64
NUP188-211ENST00000550219 CENPVL3A0A0U1RRI6 287 aa11.06□□□□□ -0.64
NUP188-211ENST00000550219 FAM230AA0A1W2PPH8 454 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms