RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 OBP2BQ9NPH6 170 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 IL36GQ9NZH8 169 aa16.95■□□□□ 0.3
CTDSP2-204ENST00000548823 FOXI3A8MTJ6 420 aaPredicted RBP16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 CRTAPO75718 401 aaPredicted RBP16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 NDUFB6O95139 128 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 CD74P04233 296 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 GTF2F2P13984 249 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 RAB25P57735 213 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 TMEM255AQ5JRV8 349 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 STEAP1BQ6NZ63 245 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 C1QL2Q7Z5L3 287 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 FTMTQ8N4E7 242 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 CHST4Q8NCG5 386 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 SLC30A7Q8NEW0 376 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 OR4C16Q8NGL9 310 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 NPRL2Q8WTW4 380 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 METTL9Q9H1A3 318 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 GHITMQ9H3K2 345 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 PCDHB16Q9NRJ7 776 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 ANAPC10Q9UM13 185 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 STARD10Q9Y365 291 aa16.94■□□□□ 0.3
CTDSP2-204ENST00000548823 TRAV6A0A075B6T7 132 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 A0A0A6YYD4 124 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 TMEM235A6NFC5 223 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 SHISA9B4DS77 424 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 PEX14O75381 377 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 CBR1P16152 277 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 HIST1H1DP16402 221 aaKnown RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 MGMTP16455 207 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 CCNOP22674 350 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 IL32P24001 234 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 RRAS2P62070 204 aaPredicted RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 P2RY6Q15077 328 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 SLC22A6Q4U2R8 563 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 PDLIM3Q53GG5 364 aaPredicted RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 SFRP4Q6FHJ7 346 aaPredicted RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 C11orf71Q6IPW1 123 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 SEZ6L2Q6UXD5 910 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 MOB3CQ70IA8 216 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 ZSCAN4Q8NAM6 433 aaPredicted RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 MSI2Q96DH6 328 aaKnown RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 RAB3CQ96E17 227 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 MRPS24Q96EL2 167 aaKnown RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 ST6GAL2Q96JF0 529 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 USB1Q9BQ65 265 aaKnown RBP16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 SELENOIQ9C0D9 397 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 C20orf85Q9H1P6 137 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 ZNF221Q9UK13 617 aa16.93■□□□□ 0.3
CTDSP2-204ENST00000548823 AKR7A2O43488 359 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 CYB5AP00167 134 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 TBPP20226 339 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 CPT2P23786 658 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 MPZP25189 248 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 WNT5AP41221 380 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 CBX5P45973 191 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 TMEM50BP56557 158 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 PPA1Q15181 289 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 RBMS2Q15434 407 aaKnown RBP16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 TSC22D1Q15714 1073 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 C1QTNF12Q5T7M4 302 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 PLCXD3Q63HM9 321 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 OR56B2PQ8NGI1 322 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 PIGCQ92535 297 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 MED30Q96HR3 178 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 GAL3ST1Q99999 423 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 NICN1Q9BSH3 213 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 BANF2Q9H503 90 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 CBLN4Q9NTU7 201 aa16.92■□□□□ 0.3
CTDSP2-204ENST00000548823 IGKV1-27A0A075B6S5 117 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 MFNGO00587 321 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 SOCS1O15524 211 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 RAD51DO75771 328 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 TMEM225BP0DP42 221 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 NAT1P18440 290 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 EIF2B2P49770 351 aaKnown RBP16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 MEF2DQ14814 521 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 SAXO1Q8IYX7 474 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 FAM169BQ8N8A8 192 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 OR51T1Q8NGJ9 327 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 OR5D18Q8NGL1 313 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 RNF170Q96K19 258 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 Q96M66 194 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 MCUBQ9NWR8 336 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 PTTG3PQ9NZH4 202 aa16.91■□□□□ 0.3
CTDSP2-204ENST00000548823 A0A0A6YYJ9 748 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 A0A1W2PP11 408 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 FAM230AA0A1W2PPH8 454 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 RAB3DO95716 219 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 NGFP01138 241 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 CD3DP04234 171 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 IL5P05113 134 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 CCL2P13500 99 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 TUBG1P23258 451 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 PDZK1IP1Q13113 114 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 ZMYND11Q15326 602 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 FBXW12Q6X9E4 464 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 ZNF782Q6ZMW2 699 aaPredicted RBP16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 TRAPPC6BQ86SZ2 158 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 WDR31Q8NA23 367 aa16.9■□□□□ 0.3
CTDSP2-204ENST00000548823 Q8NFD4 153 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms