RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RFPL4AA6NLU0 287 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 RFPL4AL1F8VTS6 287 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 PRODHO43272 600 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 MTRF1O75570 445 aaKnown RBP13.29□□□□□ -0.28
SSH1-208ENST00000548522 PSMB9P28065 219 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 RPL31P62899 125 aaKnown RBP13.29□□□□□ -0.28
SSH1-208ENST00000548522 GNG3P63215 75 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 TMED1Q13445 227 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 TIMM50Q3ZCQ8 353 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 KLHL22Q53GT1 634 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 C11orf87Q6NUJ2 197 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 LIAT1Q6ZQX7 453 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 SHFQ7M4L6 423 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 NDUFA11Q86Y39 141 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 Q8N2B8 174 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 THEM6Q8WUY1 208 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 RFKQ969G6 155 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 JAM3Q9BX67 310 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 FGF20Q9NP95 211 aaPredicted RBP13.29□□□□□ -0.28
SSH1-208ENST00000548522 TCF19Q9Y242 345 aa13.29□□□□□ -0.28
SSH1-208ENST00000548522 SYNGR1O43759 233 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 ENTPD6O75354 484 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
SSH1-208ENST00000548522 MAP2K4P45985 399 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 ZNF91Q05481 1191 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 RAB40BQ12829 278 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 TMEM236Q5W0B7 351 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 ACP7Q6ZNF0 438 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.28□□□□□ -0.28
SSH1-208ENST00000548522 CROCCP3Q8IVE0 287 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 TMEM80Q96HE8 168 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 HIST1H2AAQ96QV6 131 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 NAA50Q9GZZ1 169 aaKnown RBP13.28□□□□□ -0.28
SSH1-208ENST00000548522 HEXA-AS1Q9H8Q6 139 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 PALMDQ9NP74 551 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 ISYNA1Q9NPH2 558 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 AASSQ9UDR5 926 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSH1-208ENST00000548522 DIMT1Q9UNQ2 313 aaKnown RBP13.28□□□□□ -0.28
SSH1-208ENST00000548522 LRP12Q9Y561 859 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 A3GALT2U3KPV4 340 aa13.28□□□□□ -0.28
SSH1-208ENST00000548522 A0A1W2PRX2 142 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 A6NDX4 124 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 FAM90A8PA6NJQ4 464 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 PRR32B1ATL7 298 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 PSMD9O00233 223 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 MPIG6BO95866 241 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 IGLL1P15814 213 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 FAHP16930 419 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 C21orf33P30042 268 aaPredicted RBP13.27□□□□□ -0.29
SSH1-208ENST00000548522 HCCSP53701 268 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
SSH1-208ENST00000548522 CEACAM21Q3KPI0 293 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 TCEANCQ8N8B7 351 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 BBS1Q8NFJ9 593 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 OR4F17Q8NGA8 305 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 OR4F4Q96R69 305 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 MND1Q9BWT6 205 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 WNT10AQ9GZT5 417 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 NIPAL2Q9H841 368 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 TVP23BQ9NYZ1 205 aa13.27□□□□□ -0.29
SSH1-208ENST00000548522 PRKYO43930 277 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 CD36P16671 472 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 PRDX2P32119 198 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 SERPINB10P48595 397 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 DLX6P56179 175 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 LGALS4P56470 323 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 BLCAPP62952 87 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 CNN3Q15417 329 aaKnown RBP13.26□□□□□ -0.29
SSH1-208ENST00000548522 SNAPC1Q16533 368 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 PLCXD3Q63HM9 321 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 MOB3CQ70IA8 216 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 POC1AQ8NBT0 407 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 FAM206AQ9NX38 181 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 ERGIC3Q9Y282 383 aa13.26□□□□□ -0.29
SSH1-208ENST00000548522 LSM2Q9Y333 95 aaKnown RBP13.26□□□□□ -0.29
SSH1-208ENST00000548522 EXOSC1Q9Y3B2 195 aaKnown RBP13.26□□□□□ -0.29
SSH1-208ENST00000548522 OR5B21A6NL26 309 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 ODF3BA8MYP8 253 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 K7EIL1 84 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 ARG1P05089 322 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 PGA5P0DJD9 388 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 SSX2Q16385 188 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 SMIM21Q3B7S5 101 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 KRT74Q7RTS7 529 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 COMMD2Q86X83 199 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 GID4Q8IVV7 300 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 ZNF454Q8N9F8 522 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 OR2T27Q8NH04 317 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 ZNF671Q8TAW3 534 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 OR51E1Q8TCB6 317 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 IL4I1Q96RQ9 567 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 TTTY10Q9BZA0 68 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 GPR84Q9NQS5 396 aa13.25□□□□□ -0.29
SSH1-208ENST00000548522 IGLV3-1P01715 115 aa13.24□□□□□ -0.29
SSH1-208ENST00000548522 ALOX5APP20292 161 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms