RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZNF879B4DU55 563 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 H3BSH0 61 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 SIGLEC5O15389 551 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 GATBO75879 557 aaKnown RBP11.37□□□□□ -0.59
PTCH1-217ENST00000548420 SERPINA3P01011 423 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 RPSAP08865 295 aaKnown RBP11.37□□□□□ -0.59
PTCH1-217ENST00000548420 GNAO1P09471 354 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 HOXD3P31249 432 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-217ENST00000548420 CAV3P56539 151 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 IL24Q13007 206 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 ACP7Q6ZNF0 438 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 C1orf122Q6ZSJ8 110 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 ANGPTL5Q86XS5 388 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 PNLDC1Q8NA58 520 aaKnown RBP11.37□□□□□ -0.59
PTCH1-217ENST00000548420 OR51A4Q8NGJ6 313 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 OR10AC1Q8NH08 325 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 TFAP2CQ92754 450 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 FGGYQ96C11 551 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 SDSLQ96GA7 329 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 HHLA2Q9UM44 414 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 DIMT1Q9UNQ2 313 aaKnown RBP11.37□□□□□ -0.59
PTCH1-217ENST00000548420 SLC7A11Q9UPY5 501 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 POLDIP2Q9Y2S7 368 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 CAB39Q9Y376 341 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-217ENST00000548420 MAB21L2Q9Y586 359 aa11.37□□□□□ -0.59
PTCH1-217ENST00000548420 IRGMA1A4Y4 181 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 TMEM212A6NML5 194 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 H0YJX3 145 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 NDUFB3O43676 98 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 ZFPL1O95159 310 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 MT-ND2P03891 347 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 SELLP14151 372 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 CD33P20138 364 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 GABRA5P31644 462 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 ETV1P50549 477 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 GBX2P52951 348 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-217ENST00000548420 GMFBP60983 142 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 DGUOKQ16854 277 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 ZFAND6Q6FIF0 208 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 ZNF485Q8NCK3 441 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 NRG4Q8WWG1 115 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 GGHQ92820 318 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 ZNF488Q96MN9 340 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 DCTN5Q9BTE1 182 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 SIRPDQ9H106 197 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 PLCXD1Q9NUJ7 323 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 MTCH1Q9NZJ7 389 aa11.36□□□□□ -0.59
PTCH1-217ENST00000548420 FAM230AA0A1W2PPH8 454 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 TFF1P04155 84 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 CCDC159P0C7I6 412 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 PIPP12273 146 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-217ENST00000548420 ATF1P18846 271 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 CCDC58Q4VC31 144 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 CRIP3Q6Q6R5 217 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 C8orf59Q8N0T1 100 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-217ENST00000548420 CD177Q8N6Q3 437 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 ZNF676Q8N7Q3 588 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 PPP1R35Q8TAP8 253 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 TRMT10AQ8TBZ6 339 aaKnown RBP11.35□□□□□ -0.59
PTCH1-217ENST00000548420 ST8SIA4Q92187 359 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 WDFY2Q96P53 400 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 PDCD1LG2Q9BQ51 273 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 SEBOXQ9HB31 216 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-217ENST00000548420 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
PTCH1-217ENST00000548420 KPTNQ9Y664 436 aa11.35□□□□□ -0.59
PTCH1-217ENST00000548420 NKX6-3A6NJ46 265 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 RFPL4AA6NLU0 287 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 RFPL4AL1F8VTS6 287 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 OGG1O15527 345 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 TOX4O94842 621 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 CD28P10747 220 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 PRKACBP22694 351 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 PRDX2P32119 198 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 TGFBR2P37173 567 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 RBP2P50120 134 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-217ENST00000548420 ARF6P62330 175 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 EMX1Q04741 257 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-217ENST00000548420 IKZF1Q13422 519 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 CNN3Q15417 329 aaKnown RBP11.34□□□□□ -0.59
PTCH1-217ENST00000548420 SMIM21Q3B7S5 101 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 RPL22L1Q6P5R6 122 aaKnown RBP11.34□□□□□ -0.59
PTCH1-217ENST00000548420 PARP16Q8N5Y8 322 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 OR5AK2Q8NH90 309 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 NPRL2Q8WTW4 380 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 SPSB1Q96BD6 273 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 BORCS8Q96FH0 119 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 TMEM80Q96HE8 168 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 ASCL2Q99929 193 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 BABAM2Q9NXR7 383 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 CNOT2Q9NZN8 540 aaKnown RBP11.34□□□□□ -0.59
PTCH1-217ENST00000548420 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-217ENST00000548420 CLEC2DQ9UHP7 191 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 PSORS1C1Q9UIG5 152 aa11.34□□□□□ -0.59
PTCH1-217ENST00000548420 SIRT4Q9Y6E7 314 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms