RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 IKZF1Q13422 519 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 ZNF146Q15072 292 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 RSU1Q15404 277 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 LRRC10Q5BKY1 277 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 SPIN3Q5JUX0 258 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 GLT8D1Q68CQ7 371 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 ZNF561Q8N587 486 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 ZNRF1Q8ND25 227 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 S100A13Q99584 98 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 METTL9Q9H1A3 318 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 MMP26Q9NRE1 261 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 MRPS28Q9Y2Q9 187 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 DOCK11Q5JSL3 2073 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 ARHGAP32A7KAX9 2087 aa14.2□□□□□ -0.14
RABGGTA-203ENST00000543002 LOC105371242A0A075B767 164 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 TRAV1-2A0A0B4J238 106 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 HAND1O96004 215 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 CHRM2P08172 466 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 CD36P16671 472 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 GATA3P23771 443 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 C1orf100Q5SVJ3 147 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 CD276Q5ZPR3 534 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 C22orf42Q6IC83 251 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 FGFRL1Q8N441 504 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 OR4D6Q8NGJ1 314 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 OR10K1Q8NGX5 313 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 ST8SIA4Q92187 359 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 DACT3Q96B18 629 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 EXOSC4Q9NPD3 245 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 TMEM160Q9NX00 188 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 SLC25A10Q9UBX3 287 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 GLS2Q9UI32 602 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 SSR3Q9UNL2 185 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 GSTK1Q9Y2Q3 226 aa14.19□□□□□ -0.14
RABGGTA-203ENST00000543002 IGHV2-70DA0A0C4DH43 119 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 A0A0G2JMP0 313 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 A0A0X1KG70 313 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 C22orf46C9J442 243 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 ZNF780AO75290 641 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 HTR3BO95264 441 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 ECDO95905 644 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 DUSP1P28562 367 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 SNU13P55769 128 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 CAV3P56539 151 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 COL10A1Q03692 680 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 GPR176Q14439 515 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 DCAF12L2Q5VW00 463 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 AWAT2Q6E213 333 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 GLIPR1L1Q6UWM5 242 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 TMEM185AQ8NFB2 350 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 OR4M2Q8NGB6 313 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 OR51T1Q8NGJ9 327 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 TBC1D15Q8TC07 691 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 RAB40AQ8WXH6 277 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 GFI1Q99684 422 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 OR51E2Q9H255 320 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 PCDHB16Q9NRJ7 776 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 TXNL4BQ9NX01 149 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 AK6Q9Y3D8 172 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 INSIG2Q9Y5U4 225 aa14.18□□□□□ -0.14
RABGGTA-203ENST00000543002 KIR2DS1A0A191URI9 304 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 J3QLI3 93 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 SH2D1BO14796 132 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 ZNF737O75373 536 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 CSTBP04080 98 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 GADD45AP24522 165 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 MYL9P24844 172 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 CR1LQ2VPA4 569 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 SLC22A6Q4U2R8 563 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 BTN2A1Q7KYR7 527 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 YIPF6Q96EC8 236 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 C1orf147Q96MC9 270 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 NUDT16L1Q9BRJ7 211 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 MRPS26Q9BYN8 205 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 FAM234AQ9H0X4 552 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
RABGGTA-203ENST00000543002 SHISA3A0PJX4 238 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 INAFM1C9JVW0 142 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 K7N7A8 449 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 PDCD5O14737 125 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 ENSAO43768 121 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 TK1P04183 234 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 NDUFB7P17568 137 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 SERPINA2P20848 420 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 PSMD7P51665 324 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 CAPZA1P52907 286 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 IL13RA2Q14627 380 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 NHLRC3Q5JS37 347 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 FAHD2BQ6P2I3 314 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 BTNL3Q6UXE8 466 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 OSR2Q8N2R0 312 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 ASCC1Q8N9N2 400 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 OR6M1Q8NGM8 313 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 FAHD2AQ96GK7 314 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 CHCHD6Q9BRQ6 235 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 DCTN5Q9BTE1 182 aa14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 RPUSD1Q9UJJ7 312 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 NSD1Q96L73 2696 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-203ENST00000543002 WNK2Q9Y3S1 2297 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms