RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 UNKLQ9H9P5 680 aaKnown RBP5.04□□□□□ -1.6
ATXN2-215ENST00000542287 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
ATXN2-215ENST00000542287 V9GYS6 101 aa5.04□□□□□ -1.6
ATXN2-215ENST00000542287 PKD1L2Q7Z442 2459 aa5.04□□□□□ -1.6
ATXN2-215ENST00000542287 MAP1BP46821 2468 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MFNGO00587 321 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MSTNO14793 375 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PPIHO43447 177 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MBP02144 154 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 HEXAP06865 529 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ERCC1P07992 297 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 NR2C1P13056 603 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 G0S2P27469 103 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GFRA1P56159 465 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SEC61A1P61619 476 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 CEACAM16Q2WEN9 425 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 LRRC37A5PQ49AS3 106 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ABLIM2Q6H8Q1 611 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 TGIF2LXQ8IUE1 241 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SKA3Q8IX90 412 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 STEAP2Q8NFT2 490 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 RNASE11Q8TAA1 199 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 FAM57AQ8TBR7 257 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MARCH1Q8TCQ1 289 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MISP3Q96FF7 219 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SEC22AQ96IW7 307 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 TMPRSS13Q9BYE2 586 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 CHST5Q9GZS9 411 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 OPN3Q9H1Y3 402 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GPR173Q9NS66 373 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ASF1BQ9NVP2 202 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SLC2A8Q9NY64 477 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PRR13Q9NZ81 148 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GAB2Q9UQC2 676 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ITPR1Q14643 2758 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 IGKV1-27A0A075B6S5 117 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 A0A0U1RQV5 110 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 RFPL4AA6NLU0 287 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 FOXI3A8MTJ6 420 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 RFPL4AL1F8VTS6 287 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GPR31O00270 319 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ANGPTL7O43827 346 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MED6O75586 246 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 FCGR2AP12318 317 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PAX1P15863 534 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PI3P19957 117 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ZBTB25P24278 435 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ZNF84P51523 738 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 FOXG1P55316 489 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PSG4Q00888 419 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SRYQ05066 204 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 HLXQ14774 488 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 RNFT1Q5M7Z0 435 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SAPCD1Q5SSQ6 148 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 C9orf135Q5VTT2 229 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 CLEC2AQ6UVW9 174 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ALKAL2Q6UX46 152 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 AAED1Q7RTV5 226 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GPR137CQ8N3F9 429 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 NAXEQ8NCW5 288 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 BPIFCQ8NFQ6 507 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 OR4K15Q8NH41 348 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 OR2V1Q8NHB1 315 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 KCNG3Q8TAE7 436 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 DTD1Q8TEA8 209 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SARAFQ96BY9 339 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MARS2Q96GW9 593 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SF3B5Q9BWJ5 86 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 TMEM38BQ9NVV0 291 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ZNF107Q9UII5 783 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 NOP16Q9Y3C1 178 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 CACNA1BQ00975 2339 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 IGKV1D-8A0A087WSZ0 117 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 TRGV5A0A0B4J1U4 118 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 GJE1A6NN92 205 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 DISC1C4P0D8 188 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 SDCBPO00560 298 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 KCNAB3O43448 404 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 WDR1O75083 606 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 IGHV2-5P01817 119 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MGMTP16455 207 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 AKR1C4P17516 323 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 NUTF2P61970 127 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 TLE1Q04724 770 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 MEF2DQ14814 521 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 OR2W3Q7Z3T1 314 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 FAM219AQ8IW50 185 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 OR51T1Q8NGJ9 327 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 CASTOR1Q8WTX7 329 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 FOXB1Q99853 325 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PRRT1Q99946 306 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 HDHD3Q9BSH5 251 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ARL6Q9H0F7 186 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 PRDM13Q9H4Q3 707 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 BARX1Q9HBU1 254 aaPredicted RBP5.03□□□□□ -1.6
ATXN2-215ENST00000542287 UPB1Q9UBR1 384 aa5.03□□□□□ -1.6
ATXN2-215ENST00000542287 ACACBO00763 2458 aa5.02□□□□□ -1.61
ATXN2-215ENST00000542287 SHANK1Q9Y566 2161 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms