RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RAB4BP61018 213 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 RPL10AP62906 217 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 SLC7A9P82251 487 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 RELAQ04206 551 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 GUCA2BQ16661 112 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ATP6V1FQ16864 119 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 SAPCD1Q5SSQ6 148 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 C9orf129Q5T035 196 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 PTRHD1Q6GMV3 140 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 WDR82Q6UXN9 313 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 Q6ZR54 194 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF621Q6ZSS3 439 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 CDKL3Q8IVW4 592 aaPredicted RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 FAM71E2Q8N5Q1 922 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TBC1D19Q8N5T2 526 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ZFP41Q8N8Y5 198 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 OR8U1Q8NH10 309 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ACTRT1Q8TDG2 376 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 RPEQ96AT9 228 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TMIGD2Q96BF3 282 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TIPINQ9BVW5 301 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 SLC25A2Q9BXI2 301 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 PRRG3Q9BZD7 231 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 LHX5Q9H2C1 402 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 STMN3Q9NZ72 180 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 CD84Q9UIB8 345 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF225Q9UK10 706 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 PYCARDQ9ULZ3 195 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ERGIC3Q9Y282 383 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TRAPPC4Q9Y296 219 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 V9GYY9 64 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ANK1P16157 1881 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TMEM131Q92545 1883 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 DOPEY1Q5JWR5 2465 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 COL5A1P20908 1838 aaPredicted RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 TEP1Q99973 2627 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 PCDH15Q96QU1 1955 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 NID2Q14112 1375 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 NUMA1Q14980 2115 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 PTPN13Q12923 2485 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 TDRD6O60522 2096 aaKnown RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 OBSL1O75147 1896 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 IGLV3-10A0A075B6K4 115 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 TMEM210A6NLX4 147 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 TRPC5OSA6NMA1 111 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ANKRD65E5RJM6 399 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 H3BQF6 201 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 K7EQS6 105 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 LAD1O00515 517 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 PFDN6O15212 129 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ENTPD5O75356 428 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 CBR3O75828 277 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 GABARAPO95166 117 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 LYPLA2O95372 231 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ATP6V1G2O95670 118 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 IGHV4-34P06331 123 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 KCNE1P15382 129 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 CRISP2P16562 243 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF30P17039 623 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 IVDP26440 423 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 HTR2CP28335 458 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 CDKN2BP42772 138 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 UBE2AP49459 152 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 NCBP2P52298 156 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF121P58317 390 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 TAS2R60P59551 318 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 UBE2NP61088 152 aaKnown RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 HERVK_113P61574 105 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 LYZP61626 148 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 PPP1CBP62140 327 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 SLC35B1P78383 322 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 UNC119Q13432 240 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 PON3Q15166 354 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 PIGGQ5H8A4 983 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 FHL5Q5TD97 284 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 KCTD16Q68DU8 428 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF544Q6NX49 715 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 ALKAL1Q6UXT8 129 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 NPSR1Q6W5P4 371 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 C6orf120Q7Z4R8 191 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 FAM86B1Q8N7N1 296 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 NOXO1Q8NFA2 376 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 OR4D6Q8NGJ1 314 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 OR6N2Q8NGY6 317 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 OR10J6PQ8NGY7 276 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 TFGQ92734 400 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 IMMP1LQ96LU5 166 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 OR2M2Q96R28 347 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 HDHD3Q9BSH5 251 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 RAB1BQ9H0U4 201 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 EDA2RQ9HAV5 297 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 MYOZ1Q9NP98 299 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 PRSS16Q9NQE7 514 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 MMP26Q9NRE1 261 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 STX18Q9P2W9 335 aaKnown RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 CTSFQ9UBX1 484 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 LRRC42Q9Y546 428 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 MYO9AB2RTY4 2548 aa2.99□□□□□ -1.93
SNHG1-217ENST00000541578 MUC22E2RYF6 1773 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-217ENST00000541578 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms