RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RBM11P57052 281 aaKnown RBP7.82□□□□□ -1.16
DDX55-208ENST00000541259 FGF12P61328 243 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 RPS27AP62979 156 aaKnown RBP7.82□□□□□ -1.16
DDX55-208ENST00000541259 MRPS11P82912 194 aaKnown RBP7.82□□□□□ -1.16
DDX55-208ENST00000541259 MADCAM1Q13477 382 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 MOGAT2Q3SYC2 334 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 AVPI1Q5T686 147 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 MZT2AQ6P582 158 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 OR2W3Q7Z3T1 314 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 CMTM4Q8IZR5 234 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 OSR2Q8N2R0 312 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 OR51T1Q8NGJ9 327 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 KCNG3Q8TAE7 436 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 ACOT12Q8WYK0 555 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 AP3S1Q92572 193 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 C6orf62Q9GZU0 229 aaPredicted RBP7.82□□□□□ -1.16
DDX55-208ENST00000541259 LPAR5Q9H1C0 372 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 TMEM165Q9HC07 324 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 DLL4Q9NR61 685 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 RASL12Q9NYN1 266 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 FBLN5Q9UBX5 448 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 OR14J1Q9UGF5 321 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 RAB22AQ9UL26 194 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 ST3GAL6Q9Y274 331 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 AKAP9Q99996 3911 aa7.82□□□□□ -1.16
DDX55-208ENST00000541259 IGKV1D-17A0A075B6S4 117 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 PPIAL4EA0A075B759 164 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 A0A1B0GW55 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 OOEPA6NGQ2 149 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 RFPL4AA6NLU0 287 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 PPIAL4DF5H284 164 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 RFPL4AL1F8VTS6 287 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 IFNL4K9M1U5 179 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 LGALS8O00214 317 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 GEMIN2O14893 280 aaKnown RBP7.81□□□□□ -1.16
DDX55-208ENST00000541259 SOCS1O15524 211 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 PPIHO43447 177 aaKnown RBP7.81□□□□□ -1.16
DDX55-208ENST00000541259 TMEM127O75204 238 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 ZNF780AO75290 641 aaPredicted RBP7.81□□□□□ -1.16
DDX55-208ENST00000541259 IGHV2-70P01814 119 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 GYPAP02724 150 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L2P0CJ85 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L3P0CJ86 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L4P0CJ87 422 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L5P0CJ88 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L6P0CJ89 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L7P0CJ90 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 PPIAL4FP0DN26 164 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 PSG2P11465 335 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 GTF2F2P13984 249 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 ELK1P19419 428 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 AMY2BP19961 511 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 RAB6AP20340 208 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 GABRR1P24046 479 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 VEGFCP49767 419 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 CAPZA1P52907 286 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 SCN1BQ07699 218 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DYNC1I2Q13409 638 aaKnown RBP7.81□□□□□ -1.16
DDX55-208ENST00000541259 GPR176Q14439 515 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 ZMYND11Q15326 602 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 TAF9Q16594 264 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DEFB113Q30KQ7 82 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 TEX36Q5VZQ5 186 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 SIGIRRQ6IA17 410 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 Q6P435 159 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4L9Q6RFH8 374 aaPredicted RBP7.81□□□□□ -1.16
DDX55-208ENST00000541259 FAM90A1Q86YD7 464 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 LAX1Q8IWV1 398 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 Q8IYB0 196 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 C1orf87Q8N0U7 546 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 CD177Q8N6Q3 437 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 Q96M66 194 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 MRI1Q9BV20 369 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 TM2D1Q9BX74 207 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 TMEM59Q9BXS4 323 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 CST11Q9H112 138 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 ATG5Q9H1Y0 275 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 MMP27Q9H306 513 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 CHODLQ9H9P2 273 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 RHOFQ9HBH0 211 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 BEX4Q9NWD9 120 aaPredicted RBP7.81□□□□□ -1.16
DDX55-208ENST00000541259 RHBDL2Q9NX52 303 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 NLKQ9UBE8 527 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DNAJB11Q9UBS4 358 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 DUX4Q9UBX2 424 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 WIPI2Q9Y4P8 454 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 PPIAL4AQ9Y536 164 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 ETV7Q9Y603 341 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 NPTNQ9Y639 398 aa7.81□□□□□ -1.16
DDX55-208ENST00000541259 ABCA2Q9BZC7 2435 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 MALRD1Q5VYJ5 2156 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 CR1P17927 2039 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 OR2AT4A6NND4 320 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 FOXI3A8MTJ6 420 aaPredicted RBP7.8□□□□□ -1.16
DDX55-208ENST00000541259 CLDN25C9JDP6 229 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 SIRPB1O00241 398 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 TNFRSF13BO14836 293 aaPredicted RBP7.8□□□□□ -1.16
DDX55-208ENST00000541259 RGS5O15539 181 aa7.8□□□□□ -1.16
DDX55-208ENST00000541259 CLPXO76031 633 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms