RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 PLA2G3Q9NZ20 509 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 hCG_1809904A0A1W2PP81 198 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 A0A1W2PR64 198 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 A0A1W2PR80 420 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 A0A1W2PRV1 198 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 FAM24AA6NFZ4 105 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 NPIPB13A6NJU9 1138 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 NPIPB4C9JG80 1138 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 HSD17B6O14756 317 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 SNAPC5O75971 98 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 P04436 131 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 NAT2P11245 290 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 AADACP22760 399 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 SNRPEP62304 92 aaKnown RBP12.24□□□□□ -0.45
INO80E-203ENST00000540562 ACTBL2Q562R1 376 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 Q6ZPA2 131 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 OR6S1Q8NH40 331 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 OR1F12Q8NHA8 337 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 DEPPQ9NTK1 212 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 CADP27708 2225 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 GPM6AP51674 278 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
INO80E-203ENST00000540562 PEA15Q15121 130 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 TRIM61Q5EBN2 209 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 TMEM268Q5VZI3 342 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 LINC00696Q6ZRV3 163 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 FAM89BQ8N5H3 189 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 HLA-CQ95604 372 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 TP53RKQ96S44 253 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
INO80E-203ENST00000540562 SEMA5BQ9P283 1151 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 PRELID3BQ9Y3B1 194 aa12.24□□□□□ -0.45
INO80E-203ENST00000540562 RAB19A4D1S5 217 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 HS3ST1O14792 307 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 SNAPINO95295 136 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 PET100P0DJ07 73 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 DSCR4P56555 118 aaPredicted RBP12.23□□□□□ -0.45
INO80E-203ENST00000540562 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 C17orf78Q8N4C9 275 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 ZNF611Q8N823 705 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 ZFP62Q8NB50 900 aaPredicted RBP12.23□□□□□ -0.45
INO80E-203ENST00000540562 ASB13Q8WXK3 278 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 PP6455Q8WZ26 134 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 KIRREL1Q96J84 757 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 AQP10Q96PS8 301 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 FOXB1Q99853 325 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 DUSP23Q9BVJ7 150 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 A6NLC8 198 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 FBP1P09467 338 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 CCL1P22362 96 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 PPP1CCP36873 323 aaKnown RBP12.23□□□□□ -0.45
INO80E-203ENST00000540562 HAAOP46952 286 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 CLDN15P56746 228 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 LSM6P62312 80 aaKnown RBP12.23□□□□□ -0.45
INO80E-203ENST00000540562 SLC16A13Q7RTY0 426 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 LINC00518Q8N0U6 118 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 NAA11Q9BSU3 229 aaPredicted RBP12.23□□□□□ -0.45
INO80E-203ENST00000540562 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
INO80E-203ENST00000540562 PUS1Q9Y606 427 aaKnown RBP eCLIP12.23□□□□□ -0.45
INO80E-203ENST00000540562 ATMQ13315 3056 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 SSSCA1O60232 199 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 SELEP16581 610 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 FOLR3P41439 243 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 GSK3AP49840 483 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 HERV-K104P61576 105 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 RUNX1Q01196 453 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 RBMS3Q6XE24 437 aaKnown RBP12.22□□□□□ -0.45
INO80E-203ENST00000540562 AGBL5Q8NDL9 886 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 RDH5Q92781 318 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 RARRES2Q99969 163 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 ZNF700Q9H0M5 742 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 PISDQ9UG56 409 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 TRBV6-7A0A0A0MS04 114 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 C5orf49A4QMS7 147 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 Q0VFX4 171 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 RAB11FIP2Q7L804 512 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
INO80E-203ENST00000540562 URGCP-MRPS24S4R325 110 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 V9GYS6 101 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 DEDDO75618 318 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 DKK1O94907 266 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 NGFP01138 241 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 SCTP09683 121 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 MPZP25189 248 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 CBX5P45973 191 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 RAB13P51153 203 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 PPA1Q15181 289 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 ALKBH2Q6NS38 261 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 OR56B2PQ8NGI1 322 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms