RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PPIAL4FP0DN26 164 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DNASE1P24855 282 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ATP5J2P56134 94 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SMIM21Q3B7S5 101 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TEX36Q5VZQ5 186 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FAM89BQ8N5H3 189 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DEFB108BQ8NET1 73 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 OR5T2Q8NGG2 359 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CMTM3Q96MX0 182 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 URM1Q9BTM9 101 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 GSX2Q9BZM3 304 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CHODLQ9H9P2 273 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 NLKQ9UBE8 527 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DNAJB11Q9UBS4 358 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PPIAL4AQ9Y536 164 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PEX16Q9Y5Y5 336 aa15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CHD3Q12873 2000 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-213ENST00000540022 USF3Q68DE3 2245 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 OOEPA6NGQ2 149 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 LGALS8O00214 317 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SSX4O60224 188 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 KNG1P01042 644 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TFF1P04155 84 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 TNFSF8P32971 234 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 VEGFCP49767 419 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ZNF146Q15072 292 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DEFB113Q30KQ7 82 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MOGAT2Q3SYC2 334 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 LRRC28Q86X40 367 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FAM90A1Q86YD7 464 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ZNF525Q8N782 197 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 DTX3Q8N9I9 347 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RAB40AQ8WXH6 277 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PERPQ96FX8 193 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 EDARQ9UNE0 448 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 WIPI2Q9Y4P8 454 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MTORP42345 2549 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 METTL21EPA6NDL7 271 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RFPL4AA6NLU0 287 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 OR2AT4A6NND4 320 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FAM25AB3EWG3 89 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FAM25CB3EWG5 89 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FAM25GB3EWG6 89 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CLDN25C9JDP6 229 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RFPL4AL1F8VTS6 287 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 RAB27BO00194 218 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SOCS1O15524 211 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 PSG2P11465 335 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CPT2P23786 658 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 GABRR1P24046 479 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CEBPDP49716 269 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 IL13RA2Q14627 380 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 ZMYND11Q15326 602 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CARTPTQ16568 116 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MICBQ29980 383 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SPIN3Q5JUX0 258 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 SIGIRRQ6IA17 410 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 FIP1L1Q6UN15 594 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 MBD6Q96DN6 1003 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 CYYR1Q96J86 154 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 BARX1Q9HBU1 254 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 OR14J1Q9UGF5 321 aa15.84■□□□□ 0.13
TNFRSF1A-213ENST00000540022 IGKV1D-17A0A075B6S4 117 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 OR7C1O76099 320 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MUC1P15941 1255 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 AMY2BP19961 511 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 S100A5P33763 92 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PITPNBP48739 271 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TMEM33P57088 247 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 IKZF1Q13422 519 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 Q6P435 159 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ANGPTL6Q8NI99 470 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 S100A16Q96FQ6 103 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 WDFY2Q96P53 400 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ADAM30Q9UKF2 790 aa15.83■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FLNAP21333 2647 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TRAV38-1A0A0B4J264 116 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A10PA6NDY2 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A18PA6NE21 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A16PA6NEW6 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A20PA6NIJ5 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A8PA6NJQ4 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A7PA6NKC0 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FOXI3A8MTJ6 420 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A22PA8MWA6 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A12PA8MX19 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A5PA8MXJ8 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A23PA8MXZ1 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PPIHO43447 177 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 HAND1O96004 215 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CHRM2P08172 466 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A15PP0C7V4 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A13PP0C7W8 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A14PP0C7W9 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM90A24PP0C7X0 464 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CDK2P24941 298 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TMEM50BP56557 158 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 BTG1P62324 171 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SCN1BQ07699 218 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MADCAM1Q13477 382 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms