RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RPL36A-HNRNPH2H7BZ11 118 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 PLPP3O14495 311 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 GPR137BO60478 399 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 UTS2O95399 124 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 NSA2O95478 260 aaKnown RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 IFNA2P01563 188 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 HLA-DQA2P01906 255 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 KLK3P07288 261 aaPredicted RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 SPARCP09486 303 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 HIST1H1BP16401 226 aaKnown RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 S100A2P29034 98 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 FCGR2CP31995 323 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 CEACAM6P40199 344 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 OR3A2P47893 321 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 P2RY1P47900 373 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 P2RY4P51582 365 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 POLR2HP52434 150 aaKnown RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 EMP2P54851 167 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 HSD11B2P80365 405 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 DEFA6Q01524 100 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 MFGE8Q08431 387 aaPredicted RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 SPOCK1Q08629 439 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 RAB32Q13637 225 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 RBM39Q14498 530 aaKnown RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 ANKRD55Q3KP44 614 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 AWAT1Q58HT5 328 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 C1orf140Q5VVS0 124 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 MBNL2Q5VZF2 373 aaKnown RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 IGFL3Q6UXB1 125 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 Q6ZRG5 221 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 GVQW1Q8N7I0 195 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 Q8NA96 180 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 ACBD4Q8NC06 268 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 SLC26A10Q8NG04 563 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 OR5T3Q8NGG3 340 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 OR51A2Q8NGJ7 313 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 OR10G4Q8NGN3 311 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 ST7LQ8TDW4 575 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 CHST5Q9GZS9 411 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 CHRNA10Q9GZZ6 450 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 FGF21Q9NSA1 209 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 GAR1Q9NY12 217 aaKnown RBP6.68□□□□□ -1.34
CCDC60-204ENST00000539847 MMACHCQ9Y4U1 282 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 CLDN16Q9Y5I7 305 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 CNTRLQ7Z7A1 2325 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 MTORP42345 2549 aa6.68□□□□□ -1.34
CCDC60-204ENST00000539847 DIDO1Q9BTC0 2240 aaKnown RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 IGHV5-51A0A0C4DH38 117 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 FOXI3A8MTJ6 420 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 C22orf46C9J442 243 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 ADAM10O14672 748 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 TXNL1O43396 289 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 ZNF354AO60765 605 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 NDUFS6O75380 124 aaKnown RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CLDN1O95832 211 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 GPANK1O95872 356 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 PMP2P02689 132 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CLPSP04118 112 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SERPINA5P05154 406 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SNRNP70P08621 437 aaKnown RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CD63P08962 238 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 H2BFMP0C1H6 154 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 RNF224P0DH78 156 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 PAX1P15863 534 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 NQO2P16083 231 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CTLA4P16410 223 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CCL1P22362 96 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 ITGA3P26006 1051 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CHATP28329 748 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 ZNF93P35789 620 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 GPX4P36969 197 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 RBMXP38159 391 aaKnown RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 GATA4P43694 442 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 RBP2P50120 134 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SULT1A1P50225 295 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 DAP3P51398 398 aaKnown RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CCL11P51671 97 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 TMEM33P57088 247 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SLC26A5P58743 744 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 IL13RA2Q14627 380 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 CD226Q15762 336 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 GXYLT1Q4G148 440 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 HIKESHIQ53FT3 197 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 ACER2Q5QJU3 275 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 HIST2H3PS2Q5TEC6 136 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 AADACL3Q5VUY0 350 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 HLA-DQA1Q5Y7H0 255 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SP5Q6BEB4 398 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 HIST2H2BCQ6DN03 193 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 RPUSD3Q6P087 351 aaKnown RBP6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SLC22A25Q6T423 547 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 KLHL24Q6TFL4 600 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 PRSS41Q7RTY9 318 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 OOSP2Q86WS3 158 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SGPP2Q8IWX5 399 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 OR2C3Q8N628 320 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 FNDC9Q8TBE3 224 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 SECTM1Q8WVN6 248 aa6.67□□□□□ -1.34
CCDC60-204ENST00000539847 FGGYQ96C11 551 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms