RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TMEM33P57088 247 aa13□□□□□ -0.33
DDB1-216ENST00000539739 DSCR9P59020 149 aa13□□□□□ -0.33
DDB1-216ENST00000539739 ANKRD39Q53RE8 183 aa13□□□□□ -0.33
DDB1-216ENST00000539739 CLEC2AQ6UVW9 174 aa13□□□□□ -0.33
DDB1-216ENST00000539739 SLC25A26Q70HW3 274 aa13□□□□□ -0.33
DDB1-216ENST00000539739 ZNF525Q8N782 197 aa13□□□□□ -0.33
DDB1-216ENST00000539739 ZSCAN4Q8NAM6 433 aaPredicted RBP13□□□□□ -0.33
DDB1-216ENST00000539739 OR5D18Q8NGL1 313 aa13□□□□□ -0.33
DDB1-216ENST00000539739 LRRC29Q8WV35 223 aa13□□□□□ -0.33
DDB1-216ENST00000539739 TNFAIP8L1Q8WVP5 186 aa13□□□□□ -0.33
DDB1-216ENST00000539739 ABCB10Q9NRK6 738 aa13□□□□□ -0.33
DDB1-216ENST00000539739 V9GY05 133 aa13□□□□□ -0.33
DDB1-216ENST00000539739 TMEM178BH3BS89 294 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 SPRY1O43609 319 aaPredicted RBP12.99□□□□□ -0.33
DDB1-216ENST00000539739 RP2O75695 350 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 RHBDL1O75783 438 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
DDB1-216ENST00000539739 C1QBP02746 253 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 PTGFRP43088 359 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 TGIF2LYQ8IUE0 185 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 SAXO1Q8IYX7 474 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 OR51F2Q8NH61 342 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 TIMD4Q96H15 378 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 CHD3Q12873 2000 aaKnown RBP12.99□□□□□ -0.33
DDB1-216ENST00000539739 NOTCH2Q04721 2471 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 DYSFO75923 2080 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 SHISA3A0PJX4 238 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 TRAPPC2LH3BP13 241 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 TSPAN4O14817 238 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 SYNGR1O43759 233 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 CDRT1O95170 752 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 ACAA1P09110 424 aaPredicted RBP12.99□□□□□ -0.33
DDB1-216ENST00000539739 HLA-DMAP28067 261 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 GZMKP49863 264 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 ZP1P60852 638 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 GDPD3Q7L5L3 318 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 RNF144BQ7Z419 303 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 Q8IYB0 196 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 BOLLQ8N9W6 283 aaKnown RBP12.99□□□□□ -0.33
DDB1-216ENST00000539739 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 FAM168AQ92567 244 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 RAB1CQ92928 201 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 CNTD2Q9H8S5 307 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 NPTNQ9Y639 398 aa12.99□□□□□ -0.33
DDB1-216ENST00000539739 SRRM5B3KS81 715 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 NDUFS8O00217 210 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 PPIHO43447 177 aaKnown RBP12.98□□□□□ -0.33
DDB1-216ENST00000539739 AKR7A2O43488 359 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 PGA5P0DJD9 388 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 OR3A4PP47883 348 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 RAB14P61106 215 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 NCS1P62166 190 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 MXD1Q05195 221 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 AWAT2Q6E213 333 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 CRIP3Q6Q6R5 217 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 PRSS57Q6UWY2 283 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 POC1AQ8NBT0 407 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 SLAMF9Q96A28 289 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 NKX3-1Q99801 234 aaPredicted RBP12.98□□□□□ -0.33
DDB1-216ENST00000539739 FOXC2Q99958 501 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 SLIRPQ9GZT3 109 aaKnown RBP12.98□□□□□ -0.33
DDB1-216ENST00000539739 NXF2Q9GZY0 626 aaKnown RBP12.98□□□□□ -0.33
DDB1-216ENST00000539739 METTL9Q9H1A3 318 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
DDB1-216ENST00000539739 SMURF1Q9HCE7 757 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 ING4Q9UNL4 249 aa12.98□□□□□ -0.33
DDB1-216ENST00000539739 MRPS28Q9Y2Q9 187 aaKnown RBP12.98□□□□□ -0.33
DDB1-216ENST00000539739 PPIAL4EA0A075B759 164 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 PPIAL4DF5H284 164 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 ANGPTL7O43827 346 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 NXPH2O95156 264 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 LHBP01229 141 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 PPIAL4FP0DN26 164 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 CD37P11049 281 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 GLRA1P23415 457 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 HTR2CP28335 458 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 TGFBR1P36897 503 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 GPR6P46095 362 aaPredicted RBP12.97□□□□□ -0.33
DDB1-216ENST00000539739 RSU1Q15404 277 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 ZNF124Q15973 351 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 CLEC12BQ2HXU8 276 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 C1orf100Q5SVJ3 147 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 OR6M1Q8NGM8 313 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 DEDD2Q8WXF8 326 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 GFI1Q99684 422 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 RHOFQ9HBH0 211 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 DNAJB11Q9UBS4 358 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 GHRLQ9UBU3 117 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 PPIAL4AQ9Y536 164 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 PEX16Q9Y5Y5 336 aa12.97□□□□□ -0.33
DDB1-216ENST00000539739 I3L521 148 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 SLC17A2O00624 439 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 IL1AP01583 271 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 GIFP27352 417 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms