RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SND1-IT1Q9HBX3 110 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 ICOSQ9Y6W8 199 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 TRAV8-4A0A0B4J246 113 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 TRAV8-6A0A0B4J262 113 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 FAM240AA0A1B0GVK7 77 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 GSTTP1A0A1W2PQM5 241 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 SEC14L6B5MCN3 397 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 GGTLC3B5MD39 225 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 H7C2Y5 167 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 J3QT63 122 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 PSMD11O00231 422 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 PRMT5O14744 637 aaPredicted RBP1.36□□□□□ -2.19
CCDC7-209ENST00000539197 ENSAO43768 121 aaKnown RBP1.36□□□□□ -2.19
CCDC7-209ENST00000539197 SPOPO43791 374 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 ALOX12BO75342 701 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 VAPBO95292 243 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 P01737 135 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 RHOCP08134 193 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 OR4Q2P0C623 313 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 LIPCP11150 499 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 LCN1P31025 176 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 DEKP35659 375 aaKnown RBP1.36□□□□□ -2.19
CCDC7-209ENST00000539197 MTPNP58546 118 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 ZNF181Q2M3W8 571 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 SLC7A5P1Q8MH63 180 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 SYS1Q8N2H4 156 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 OR2M7Q8NG81 312 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 TMIGD2Q96BF3 282 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 SMARCD1Q96GM5 515 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 SLC25A44Q96H78 314 aaPredicted RBP1.36□□□□□ -2.19
CCDC7-209ENST00000539197 PPP1R36Q96LQ0 422 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 TSNAXQ99598 290 aaKnown RBP1.36□□□□□ -2.19
CCDC7-209ENST00000539197 PORCNQ9H237 461 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 DDIT4Q9NX09 232 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 STK38LQ9Y2H1 464 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 ELP1O95163 1332 aa1.36□□□□□ -2.19
CCDC7-209ENST00000539197 MYO9BQ13459 2157 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 ANKRD20A5PA0PJZ0 165 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 FAM25EA8MYX2 175 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 SLC31A1O15431 190 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 IVLP07476 585 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 SLC35G6P0C7Q6 338 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 MLNP12872 115 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 CSRP1P21291 193 aaKnown RBP1.35□□□□□ -2.19
CCDC7-209ENST00000539197 CCNOP22674 350 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 GPR4P46093 362 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 TAS2R60P59551 318 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 LAMTOR4Q0VGL1 99 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 TNXAQ16473 311 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 FBXO48Q5FWF7 155 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 KCTD16Q68DU8 428 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 SETD3Q86TU7 594 aaPredicted RBP1.35□□□□□ -2.19
CCDC7-209ENST00000539197 COMTD1Q86VU5 262 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 TRIML2Q8N7C3 387 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 OR5H2Q8NGV7 314 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 OR10Z1Q8NGY1 313 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 OR6N2Q8NGY6 317 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 FAM57AQ8TBR7 257 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 LRRC20Q8TCA0 184 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 CPB2Q96IY4 423 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 ADTRPQ96IZ2 230 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 GLT1D1Q96MS3 346 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 C20orf166-AS1Q96NR2 134 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 RAB1BQ9H0U4 201 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 C6orf50Q9HD87 102 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 TMEM106BQ9NUM4 274 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 ORC6Q9Y5N6 252 aa1.35□□□□□ -2.19
CCDC7-209ENST00000539197 BAZ1BQ9UIG0 1483 aaKnown RBP1.35□□□□□ -2.19
CCDC7-209ENST00000539197 ZNF608Q9ULD9 1512 aaPredicted RBP1.35□□□□□ -2.19
CCDC7-209ENST00000539197 IGKV1OR2-108A0A075B7D4 117 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 LOC100506127A0A0U1RQW1 187 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 RAB19A4D1S5 217 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 GMNCA6NCL1 334 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 MGAT4DA6NG13 374 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 ERICH4A6NGS2 130 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 LEUTXA8MZ59 168 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 K7ERS5 55 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 M0R1B8 84 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 DHRS3O75911 302 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 OR5AL1P0C617 328 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 PTHLHP12272 177 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 CCL2P13500 99 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 ARR3P36575 388 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 P2RY2P41231 377 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 HADHBP55084 474 aaKnown RBP1.34□□□□□ -2.19
CCDC7-209ENST00000539197 TNNC1P63316 161 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 ENDOGQ14249 297 aaKnown RBP1.34□□□□□ -2.19
CCDC7-209ENST00000539197 PMVKQ15126 192 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 Q3ZCU0 254 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 CDNFQ49AH0 187 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 ACTL10Q5JWF8 245 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 FAHD1Q6P587 224 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 Q6ZQT7 251 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 PRNTQ86SH4 94 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 RBM45Q8IUH3 476 aaKnown RBP1.34□□□□□ -2.19
CCDC7-209ENST00000539197 CA13Q8N1Q1 262 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 RPRMLQ8N4K4 120 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 ATPAF2Q8N5M1 289 aa1.34□□□□□ -2.19
CCDC7-209ENST00000539197 LINC00337Q8N6G1 96 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms