RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 IGHV1-69-2A0A0G2JMI3 117 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 A0A0G2JMP0 313 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 A0A0X1KG70 313 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 FAM221AA4D161 298 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 LRRC30A6NM36 301 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 J3QRK9 145 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
CD4-208ENST00000538827 SOCS1O15524 211 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 OR7C1O76099 320 aaPredicted RBP11.91□□□□□ -0.5
CD4-208ENST00000538827 DUSP1P28562 367 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 ETV6P41212 452 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 ZNF45Q02386 682 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 SCN1BQ07699 218 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 SMIM21Q3B7S5 101 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 ELP2Q6IA86 826 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 PYHIN1Q6K0P9 492 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 RTN4RL2Q86UN3 420 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 C19orf18Q8NEA5 215 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 OR4M2Q8NGB6 313 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 OR10R2Q8NGX6 335 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 GCDHQ92947 438 aaPredicted RBP11.91□□□□□ -0.5
CD4-208ENST00000538827 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
CD4-208ENST00000538827 PLEKHF2Q9H8W4 249 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 DCAF16Q9NXF7 216 aa11.91□□□□□ -0.5
CD4-208ENST00000538827 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
CD4-208ENST00000538827 SRRM5B3KS81 715 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 HSPB6O14558 160 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 XRCC3O43542 346 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 CHRM2P08172 466 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 ZNF44P15621 663 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 BLVRBP30043 206 aaPredicted RBP11.9□□□□□ -0.5
CD4-208ENST00000538827 MNDAP41218 407 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 NR4A2P43354 598 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.5
CD4-208ENST00000538827 ERVK11-1P61568 191 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 IL13RA2Q14627 380 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 ZNF79Q15937 498 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 FAM201AQ5SY85 155 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 RAB12Q6IQ22 244 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 ACP7Q6ZNF0 438 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 C1orf87Q8N0U7 546 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 ZNF295-AS1Q8N0V1 137 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 Q8TCH9 128 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 CCL17Q92583 94 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 SEH1LQ96EE3 360 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 NEDD4LQ96PU5 975 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 ZMAT3Q9HA38 289 aaKnown RBP11.9□□□□□ -0.5
CD4-208ENST00000538827 RHOFQ9HBH0 211 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 ZNF581Q9P0T4 197 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 NPTNQ9Y639 398 aa11.9□□□□□ -0.5
CD4-208ENST00000538827 A0A0A6YYH2 397 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 A6NJ64 397 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 RAB27BO00194 218 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 SIRPB1O00241 398 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 NOS1APO75052 506 aaPredicted RBP11.89□□□□□ -0.51
CD4-208ENST00000538827 LY6HO94772 140 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 ZNF205O95201 554 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 HAND1O96004 215 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 TFF1P04155 84 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 INHBBP09529 407 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 PTHLHP12272 177 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 CD99P14209 185 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 PITPNAQ00169 270 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 CARTPTQ16568 116 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 MPV17LQ2QL34 196 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 NHLRC3Q5JS37 347 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 LINC00596Q86U02 117 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
CD4-208ENST00000538827 ARHGAP5-AS1Q96IT6 56 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
CD4-208ENST00000538827 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 H7C417 338 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 PDCD6O75340 191 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 KNG1P01042 644 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
CD4-208ENST00000538827 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 HIST1H1DP16402 221 aaKnown RBP11.88□□□□□ -0.51
CD4-208ENST00000538827 GNB3P16520 340 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 CD40LGP29965 261 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 PTH2RP49190 550 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 HFEQ30201 348 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 SFRP4Q6FHJ7 346 aaPredicted RBP11.88□□□□□ -0.51
CD4-208ENST00000538827 Q6ZTK2 550 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 OR8H2Q8N162 312 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 DEFB108BQ8NET1 73 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 Q8NFD4 153 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 OR5T2Q8NGG2 359 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 YIPF5Q969M3 257 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms