RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MPV17LQ2QL34 196 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SPIN3Q5JUX0 258 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZNF57Q68EA5 555 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SFRP4Q6FHJ7 346 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ELP2Q6IA86 826 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CLEC18BQ6UXF7 455 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ACP7Q6ZNF0 438 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CCDC190Q86UF4 302 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DTX2Q86UW9 622 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C11orf53Q8IXP5 236 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CLEC18CQ8NCF0 446 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 OR4M2Q8NGB6 313 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 OR5T2Q8NGG2 359 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SETD6Q8TBK2 473 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RAB1CQ92928 201 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SLC25A38Q96DW6 304 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 POM121Q96HA1 1249 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NRIP2Q9BQI9 281 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NICN1Q9BSH3 213 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LPAR5Q9H1C0 372 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TLNRD1Q9H1K6 362 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZMAT3Q9HA38 289 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MYOZ1Q9NP98 299 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 IFT46Q9NQC8 304 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TMEM106BQ9NUM4 274 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ING3Q9NXR8 418 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NLKQ9UBE8 527 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 WIPI2Q9Y4P8 454 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPIAL4AQ9Y536 164 aa9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ANKHD1Q8IWZ3 2542 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A0A1B0GWJ7 208 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 UBE2QL1A1L167 161 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A10PA6NDY2 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A18PA6NE21 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A16PA6NEW6 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A20PA6NIJ5 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A8PA6NJQ4 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A7PA6NKC0 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A22PA8MWA6 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A12PA8MX19 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A5PA8MXJ8 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A23PA8MXZ1 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 HSPB6O14558 160 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LDLRAD4O15165 306 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SOCS1O15524 211 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPIHO43447 177 aaKnown RBP8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NOS1APO75052 506 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RBBP9O75884 186 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZNF205O95201 554 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 HAND1O96004 215 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CD8AP01732 235 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 HPXP02790 462 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ACAA1P09110 424 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A15PP0C7V4 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A13PP0C7W8 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A14PP0C7W9 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A24PP0C7X0 464 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DANCRP0C864 163 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GSTT2BP0CG30 244 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DAOP14920 347 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GNB3P16520 340 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PPP5CP53041 499 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MRPS10P82664 201 aaKnown RBP8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 QRFPP83859 136 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 IL13RA2Q14627 380 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PAN3Q58A45 887 aaKnown RBP8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 Q8N402 240 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GDPD1Q8N9F7 314 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ASCC1Q8N9N2 400 aaKnown RBP8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 BORCS5Q969J3 196 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ARHGAP5-AS1Q96IT6 56 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 Q96M66 194 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TM2D1Q9BX74 207 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ABCB10Q9NRK6 738 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PCDHB10Q9UN67 800 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DYSFO75923 2080 aa8.99□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PTPN13Q12923 2485 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LINC00854A0A1B0GVQ3 168 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 OOEPA6NGQ2 149 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RFPL4AA6NLU0 287 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 OR2AT4A6NND4 320 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 RFPL4AL1F8VTS6 287 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 F8VVB4 439 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 F8VWA3 439 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 J3QRK9 145 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LGALS8O00214 317 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PDCD6O75340 191 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TPPPO94811 219 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 KNG1P01042 644 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 AVPP01185 164 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GSTP1P09211 210 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MUC1P15941 1255 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 COL8A2P25067 703 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CD40LGP29965 261 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PRDX2P32119 198 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CFHR2P36980 270 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PMELP40967 661 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ETV6P41212 452 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 EFNA4P52798 201 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms