RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SMIM10L2BP0DMW5 78 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 DUSP1P28562 367 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TSPOP30536 169 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 GCH1P30793 250 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CORO1AP31146 461 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 MSMO1Q15800 293 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 KRTCAP3Q53RY4 240 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LRRC73Q5JTD7 316 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 FAM89BQ8N5H3 189 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC46A1Q96NT5 459 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LRRC3BQ96PB8 259 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SAMD10Q9BYL1 202 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ZNF703Q9H7S9 590 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ELOVL3Q9HB03 270 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SRA1Q9HD15 236 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ARID1AO14497 2285 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TRIP12Q14669 1992 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LOC102724200A0A096LPH7 203 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 DIRC3C9JPN6 131 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 NUPR1O60356 82 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LDB3O75112 727 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CTSDP07339 412 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CD99P14209 185 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 OTX1P32242 354 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CDKN1AP38936 164 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TM4SF4P48230 202 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ID2Q02363 134 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TLE3Q04726 772 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LRRC10Q5BKY1 277 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 NBPF12Q5TAG4 269 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 C1QL3Q5VWW1 255 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 FCRL6Q6DN72 434 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC48A1Q6P1K1 146 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 OR2C3Q8N628 320 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 WDYHV1Q96HA8 205 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ELOVL5Q9NYP7 299 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 HHLA2Q9UM44 414 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC22A13Q9Y226 551 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 HIF3AQ9Y2N7 669 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 PXMP4Q9Y6I8 212 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CENPVL1A0A0U1RR11 272 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CDIPTO14735 213 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TRAF3IP2O43734 574 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 OR7C2O60412 319 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TIMP1P01033 207 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 HPNP05981 417 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 GLB1P16278 677 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 EMP2P54851 167 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LCN6P62502 163 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 PAX2Q02962 417 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 DUSP2Q05923 314 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 EXOSC7Q15024 291 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 CLEC12BQ2HXU8 276 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 FAM71F2Q6NXP2 309 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 BHLHA15Q7RTS1 189 aaPredicted RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LGI3Q8N145 548 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ZNF519Q8TB69 540 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SCAMP4Q969E2 229 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TMEM186Q96B77 213 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 TSSK2Q96PF2 358 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 ABT1Q9ULW3 272 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-202ENST00000537556 SERTM2A0A1B0GWG4 89 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 DUXBA0A1W2PPF3 345 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 NGFRP08138 427 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 UNC119Q13432 240 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 ZNF74Q16587 644 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 SAMD7Q7Z3H4 446 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 MRGPRGQ86SM5 289 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 ALG14Q96F25 216 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 GPX7Q96SL4 187 aaPredicted RBP7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 PLSCR4Q9NRQ2 329 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 FBLN5Q9UBX5 448 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 OR51B4Q9Y5P0 310 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 INSL5Q9Y5Q6 135 aa7.46□□□□□ -1.21
SRGAP1-202ENST00000537556 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 FEZF1A0PJY2 475 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 CRYM-AS1A6NIL9 109 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 TBL1XO60907 577 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 CLEC3AO75596 197 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 KBTBD11O94819 623 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 DBHP09172 617 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 MC5RP33032 325 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 RPL15P61313 204 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 SNRPD1P62314 119 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 RPL23P62829 140 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 POLR2LP62875 67 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 CSNK2A1P68400 391 aaPredicted RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 ARFRP1Q13795 201 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 PSG3Q16557 428 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 MEP1BQ16820 701 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 ZNF787Q6DD87 383 aa7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 KCTD18Q6PI47 426 aaPredicted RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.22
SRGAP1-202ENST00000537556 LSRQ86X29 649 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms