RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 PRSS50Q9UI38 385 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 NCOR1O75376 2440 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 C5orf51A6NDU8 294 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 GEMIN2O14893 280 aaKnown RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 OR5H8P0DN80 308 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 PSMB6P28072 239 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 GLP1RP43220 463 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 UCP3P55916 312 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 RTP5Q14D33 572 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 C3AR1Q16581 482 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 SLC25A26Q70HW3 274 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 KCTD9Q7L273 389 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 EIF4E3Q8N5X7 224 aaKnown RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 SLC30A7Q8NEW0 376 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 WNT2BQ93097 391 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 PHYHIPLQ96FC7 376 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 PKIBQ9C010 78 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 RDH8Q9NYR8 311 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 KCNIP3Q9Y2W7 256 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 MFSD2BA6NFX1 497 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 TRAPPC2LH3BP13 241 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 PLATP00750 562 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 IFNA2P01563 188 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 CRHP06850 196 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 SFTPBP07988 381 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 SELEP16581 610 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 RBMXP38159 391 aaKnown RBP11.69□□□□□ -0.54
SMG6-203ENST00000536871 GNG3P63215 75 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 RTN4RL2Q86UN3 420 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 SYT3Q9BQG1 590 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 SULT4A1Q9BR01 284 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 ZNF2Q9BSG1 426 aaPredicted RBP11.69□□□□□ -0.54
SMG6-203ENST00000536871 C12orf49Q9H741 205 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 CHMP1AQ9HD42 196 aaPredicted RBP11.69□□□□□ -0.54
SMG6-203ENST00000536871 GPR160Q9UJ42 338 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 STARD10Q9Y365 291 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 KCNMB2Q9Y691 235 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
SMG6-203ENST00000536871 TRBV6-7A0A0A0MS04 114 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 SDCBPO00560 298 aaPredicted RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 FOXG1P55316 489 aaPredicted RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 ZNF660Q6AZW8 331 aaPredicted RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 FBXW12Q6X9E4 464 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 Q6ZT83 130 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 C1orf174Q8IYL3 243 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 ZADH2Q8N4Q0 377 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 ZNF442Q9H7R0 627 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 KNTC1P50748 2209 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 PIGBOS1A0A0B4J2F0 54 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 A8MXK9 166 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 OR7C1O76099 320 aaPredicted RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 CTXN2P0C2S0 81 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 HOXC12P31275 282 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 SERPINF1P36955 418 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 NBL1P41271 181 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 HAAOP46952 286 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 IL24Q13007 206 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 ZNF169Q14929 603 aaPredicted RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 GUSBP1Q15486 140 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 RSPO4Q2I0M5 234 aaPredicted RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 PIGYQ3MUY2 71 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 IGFL3Q6UXB1 125 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 MDP1Q86V88 176 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 CALHM1Q8IU99 346 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 OR5P3Q8WZ94 311 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 C2orf50Q96LR7 162 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
SMG6-203ENST00000536871 RCC2Q9P258 522 aaKnown RBP11.68□□□□□ -0.54
SMG6-203ENST00000536871 KIR2DS1A0A191URI9 304 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 ZNF732B4DXR9 585 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 BCL2L11O43521 198 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 CFDP00746 253 aaPredicted RBP11.67□□□□□ -0.54
SMG6-203ENST00000536871 IFNA21P01568 189 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 KIR2DS4P43632 304 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 SUPT4H1P63272 117 aaKnown RBP11.67□□□□□ -0.54
SMG6-203ENST00000536871 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
SMG6-203ENST00000536871 KIR2DS1Q14954 304 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 EIF2S3LQ2VIR3 472 aaKnown RBP11.67□□□□□ -0.54
SMG6-203ENST00000536871 HIKESHIQ53FT3 197 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 HSD17B13Q7Z5P4 300 aaPredicted RBP11.67□□□□□ -0.54
SMG6-203ENST00000536871 Q8IYB0 196 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 FAM185AQ8N0U4 392 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 C17orf78Q8N4C9 275 aa11.67□□□□□ -0.54
SMG6-203ENST00000536871 CCDC71LQ8N9Z2 235 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms