RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 BAMBIQ13145 260 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 GPR157Q5UAW9 335 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 METTL11BQ5VVY1 283 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 C12orf54Q6X4T0 127 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ZNF573Q86YE8 665 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 LY6G5BQ8NDX9 201 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ZNF671Q8TAW3 534 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 GCDHQ92947 438 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 FOXJ3Q9UPW0 622 aa14.73□□□□□ -0.05
TNFRSF1A-209ENST00000536717 IGKV1D-17A0A075B6S4 117 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 CENPVL3A0A0U1RRI6 287 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 OR2AT4A6NND4 320 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 GABRPO00591 440 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 GPR37O15354 613 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ARL6IP5O75915 188 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 CD36P16671 472 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 GALP22466 123 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 RBP2P50120 134 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ATP1B3P54709 279 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 DGUOKQ16854 277 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 HSD17B12Q53GQ0 312 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 LRRC10Q5BKY1 277 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 RUSC1-AS1Q66K80 236 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ASPHD2Q6ICH7 369 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ZNF529Q6P280 563 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 TMEM91Q6ZNR0 172 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 LHFPL2Q6ZUX7 228 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ORAI1Q96D31 301 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 CPNE2Q96FN4 548 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 CNTD2Q9H8S5 307 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 TMEM138Q9NPI0 162 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ZNF222Q9UK12 451 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 STUB1Q9UNE7 303 aa14.72□□□□□ -0.05
TNFRSF1A-209ENST00000536717 TRDV1A0A1B0GX56 115 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 NKX6-3A6NJ46 265 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 SIGLEC5O15389 551 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 PIN1P1O15428 100 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 SYNGR1O43759 233 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 GPX5O75715 221 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 ACAA1P09110 424 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 UCHL1P09936 223 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 PSG2P11465 335 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 IGFBP3P17936 291 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 HAAOP46952 286 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 MTCP1P56278 107 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 BPIFB3P59826 476 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 IL13RA1P78552 427 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 DEFB112Q30KQ8 113 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 FAM27D1Q5T7N8 215 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 CD200R1LQ6Q8B3 271 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 OR51A2Q8NGJ7 313 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 TMIGD2Q96BF3 282 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 DCTN5Q9BTE1 182 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 SLITRK2Q9H156 845 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 PRDM13Q9H4Q3 707 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 TCF7L1Q9HCS4 588 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 SCOCQ9UIL1 159 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 MAB21L2Q9Y586 359 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 KPTNQ9Y664 436 aa14.71□□□□□ -0.05
TNFRSF1A-209ENST00000536717 TRAV8-7A0A075B6U6 113 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 J3QT63 122 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 BDKRB2P30411 391 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SLC9A3R2Q15599 337 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ACP7Q6ZNF0 438 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 POC1AQ8NBT0 407 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 C8orf46Q8TAG6 207 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MED30Q96HR3 178 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 DMRTB1Q96MA1 342 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ZNF488Q96MN9 340 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ZMAT3Q9HA38 289 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 EXOSC4Q9NPD3 245 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SLC25A10Q9UBX3 287 aaPredicted RBP14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SSR3Q9UNL2 185 aa14.71□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CLDN34H7C241 214 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 HAX1O00165 279 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ALDOBP05062 364 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 RNASE1P07998 156 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PGA5P0DJD9 388 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SRMP19623 302 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CFPP27918 469 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 GABRA2P47869 451 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PDCD1Q15116 288 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 TIMM50Q3ZCQ8 353 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CALHM1Q8IU99 346 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ZNRF1Q8ND25 227 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 LHX4Q969G2 390 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 PKIBQ9C010 78 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 POLDIP2Q9Y2S7 368 aa14.7□□□□□ -0.06
TNFRSF1A-209ENST00000536717 IGKV1-27A0A075B6S5 117 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MEGF11A6BM72 1044 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 NOS1APO75052 506 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MAS1P04201 325 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 MPZP25189 248 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CALRP27797 417 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 CAV3P56539 151 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 KISS1Q15726 138 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 DDI2Q5TDH0 399 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 VMO1Q7Z5L0 202 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 SATL1Q86VE3 508 aa14.69□□□□□ -0.06
TNFRSF1A-209ENST00000536717 ANGPTL5Q86XS5 388 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms