RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 METTL8Q9H825 291 aaKnown RBP10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ISG20L2Q9H9L3 353 aaKnown RBP10.18□□□□□ -0.78
PRKDC-207ENST00000536483 RHOFQ9HBH0 211 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 FAM230AA0A1W2PPH8 454 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 IRGMA1A4Y4 181 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 TMEM212A6NML5 194 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 SLC1A7O00341 560 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 CLPXO76031 633 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 ZFPL1O95159 310 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 TFF1P04155 84 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 TK1P04183 234 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 CHRM2P08172 466 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 CCDC159P0C7I6 412 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 IER3P46695 156 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 GABRA2P47869 451 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 UBE2E1P51965 193 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 ATP1B3P54709 279 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 GMFBP60983 142 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 ACSM1Q08AH1 577 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF146Q15072 292 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 NCR3LG1Q68D85 454 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF529Q6P280 563 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 LHFPL2Q6ZUX7 228 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 C1QL4Q86Z23 238 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 MKXQ8IYA7 352 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 SAXO1Q8IYX7 474 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 OR5D13Q8NGL4 314 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 OR10AC1Q8NH08 325 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 FBLIM1Q8WUP2 373 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 FGGYQ96C11 551 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 TSC22D3Q99576 134 aa10.17□□□□□ -0.78
PRKDC-207ENST00000536483 CAB39Q9Y376 341 aaPredicted RBP10.17□□□□□ -0.78
PRKDC-207ENST00000536483 TRBV2A0A0J9YWF9 115 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 E9PI62 339 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 F8VVB4 439 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 F8VWA3 439 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 RNASEK-C17orf49H0YIS7 233 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 TSPAN15O95858 294 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 NDUFB7P17568 137 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 AZGP1P25311 298 aaKnown RBP10.16□□□□□ -0.78
PRKDC-207ENST00000536483 GBX2P52951 348 aaPredicted RBP10.16□□□□□ -0.78
PRKDC-207ENST00000536483 GABARAPL2P60520 117 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 PDZK1IP1Q13113 114 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 SMN1Q16637 294 aaKnown RBP10.16□□□□□ -0.78
PRKDC-207ENST00000536483 HCP5Q6MZN7 132 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 Q6ZSV7 163 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 SLC25A26Q70HW3 274 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 TMEM185AQ8NFB2 350 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 OR51A4Q8NGJ6 313 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 TRMT10AQ8TBZ6 339 aaKnown RBP10.16□□□□□ -0.78
PRKDC-207ENST00000536483 H1FXQ92522 213 aaKnown RBP10.16□□□□□ -0.78
PRKDC-207ENST00000536483 ZCCHC4Q9H5U6 513 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 TCF7L1Q9HCS4 588 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 VCX3AQ9NNX9 186 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 ONECUT1Q9UBC0 465 aa10.16□□□□□ -0.78
PRKDC-207ENST00000536483 DIMT1Q9UNQ2 313 aaKnown RBP10.16□□□□□ -0.78
PRKDC-207ENST00000536483 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 OGG1O15527 345 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 KDM4BO94953 1096 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 RBP4P02753 201 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 PIPP12273 146 aaPredicted RBP10.15□□□□□ -0.78
PRKDC-207ENST00000536483 MTCP1P56278 107 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 RPL31P62899 125 aaKnown RBP10.15□□□□□ -0.78
PRKDC-207ENST00000536483 SPIN3Q5JUX0 258 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 TMEM200BQ69YZ2 307 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 RPL22L1Q6P5R6 122 aaKnown RBP10.15□□□□□ -0.78
PRKDC-207ENST00000536483 SERPINA12Q8IW75 414 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF676Q8N7Q3 588 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 ZSCAN4Q8NAM6 433 aaPredicted RBP10.15□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF485Q8NCK3 441 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 Q8NFD4 153 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 OR5D14Q8NGL3 314 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 OR5AK2Q8NH90 309 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 SNX22Q96L94 193 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 OPALINQ96PE5 141 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 NEK6Q9HC98 313 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 PLCXD1Q9NUJ7 323 aa10.15□□□□□ -0.78
PRKDC-207ENST00000536483 A0A1W2PQ09 198 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 C17orf98A8MV24 154 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 H3BSH0 61 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 NPFFO15130 113 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 CLIC3O95833 236 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 ZNF20P17024 532 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 JUNBP17275 347 aaPredicted RBP10.14□□□□□ -0.79
PRKDC-207ENST00000536483 LMO1P25800 156 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 ERP29P30040 261 aaKnown RBP10.14□□□□□ -0.79
PRKDC-207ENST00000536483 ETV1P50549 477 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 DLX6P56179 175 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 COL10A1Q03692 680 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 PRB3Q04118 309 aaPredicted RBP10.14□□□□□ -0.79
PRKDC-207ENST00000536483 MEF2CQ06413 473 aaPredicted RBP10.14□□□□□ -0.79
PRKDC-207ENST00000536483 LAIR2Q6ISS4 152 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 GDPGP1Q6ZNW5 385 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 OR8H2Q8N162 312 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 FAM58AQ8N1B3 248 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 OR13C3Q8NGS6 347 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 OR52N1Q8NH53 320 aa10.14□□□□□ -0.79
PRKDC-207ENST00000536483 FAM110DQ8TAY7 271 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms