RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CBLN3Q6UW01 205 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 DYNLRB2Q8TF09 96 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 PTPMT1Q8WUK0 201 aaPredicted RBP11.22□□□□□ -0.61
SPG11-203ENST00000535302 TRAV39A0A0B4J263 110 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 FAM24AA6NFZ4 105 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 C21orf58P58505 322 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 DUSP18Q8NEJ0 188 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 CT55Q8WUE5 264 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 MOGAT2Q3SYC2 334 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 SLC26A1Q9H2B4 701 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 TJP1Q07157 1748 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 OTOFQ9HC10 1997 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 TAAR5O14804 337 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 REG1BP48304 166 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 CLDN20P56880 219 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 CDX2Q99626 313 aaPredicted RBP11.22□□□□□ -0.61
SPG11-203ENST00000535302 PCED1AQ9H1Q7 454 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 CCL4P13236 92 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 ECSCRQ19T08 205 aa11.22□□□□□ -0.61
SPG11-203ENST00000535302 ZNF707Q96C28 371 aaPredicted RBP11.22□□□□□ -0.61
SPG11-203ENST00000535302 SP1P08047 785 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 OR5C1Q8NGR4 320 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 HRKO00198 91 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 TBX19O60806 448 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 AREGP15514 252 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 WNT3P56703 355 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 ADIPOR1Q96A54 375 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 FOXJ3Q9UPW0 622 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 BRWD1Q9NSI6 2320 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 A0A1W2PPE3 182 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 DYNLT3P51808 116 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 DOK1Q99704 481 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 HSF4Q9ULV5 492 aa11.21□□□□□ -0.61
SPG11-203ENST00000535302 NUP214P35658 2090 aaPredicted RBP11.21□□□□□ -0.62
SPG11-203ENST00000535302 OR5B21A6NL26 309 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 THBS4P35443 961 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 CDKN2AP42771 156 aaKnown RBP11.21□□□□□ -0.62
SPG11-203ENST00000535302 KISS1Q15726 138 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 RPEL1Q2QD12 228 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 NHLRC1Q6VVB1 395 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 SIGLEC7Q9Y286 467 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 SLC36A1Q7Z2H8 476 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 GPR137Q96N19 417 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 MOGAT1Q96PD6 335 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 CIB3Q96Q77 187 aaPredicted RBP11.21□□□□□ -0.62
SPG11-203ENST00000535302 ELOVL1Q9BW60 279 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 TOLLIPQ9H0E2 274 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 FGF20Q9NP95 211 aaPredicted RBP11.21□□□□□ -0.62
SPG11-203ENST00000535302 CBY1Q9Y3M2 126 aa11.21□□□□□ -0.62
SPG11-203ENST00000535302 SLC38A11Q08AI6 406 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 HGDQ93099 445 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 TM4SF19Q96DZ7 209 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 FOXC2Q99958 501 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
SPG11-203ENST00000535302 CYC1P08574 325 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 DUSP21Q9H596 190 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 MYOZ1Q9NP98 299 aaPredicted RBP11.2□□□□□ -0.62
SPG11-203ENST00000535302 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 SNRNP200O75643 2136 aaKnown RBP11.2□□□□□ -0.62
SPG11-203ENST00000535302 GLI3P10071 1580 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 CRYABP02511 175 aaKnown RBP11.2□□□□□ -0.62
SPG11-203ENST00000535302 DRD3P35462 400 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 MAGEA5P43359 124 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 CD81P60033 236 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 NSUN5P2Q63ZY6 315 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 WDR74Q6RFH5 385 aaPredicted RBP11.2□□□□□ -0.62
SPG11-203ENST00000535302 Q6ZN92 141 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 ZNF547Q8IVP9 402 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 CHRDL1Q9BU40 450 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 FBP1P09467 338 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 OR5AC1P0C628 307 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 PTBP1P26599 531 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■■□□□ 13.3
SPG11-203ENST00000535302 ZNF880Q6PDB4 577 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 KLHDC1Q8N7A1 406 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 DYRK2Q92630 601 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 ARG1P05089 322 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 GUK1Q16774 197 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 OR1K1Q8NGR3 316 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 TMEM56Q96MV1 263 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 SNRPEP62304 92 aaKnown RBP11.2□□□□□ -0.62
SPG11-203ENST00000535302 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPG11-203ENST00000535302 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 TBC1D26Q86UD7 250 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 ATP5SQ99766 215 aa11.2□□□□□ -0.62
SPG11-203ENST00000535302 ST8SIA5O15466 376 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 EPPINO95925 133 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 CCKARP32238 428 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 C1QL3Q5VWW1 255 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 BHLHA9Q7RTU4 235 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 GSX2Q9BZM3 304 aa11.19□□□□□ -0.62
SPG11-203ENST00000535302 KCNE1BA0A087WTH5 132 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms