RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FAT1Q14517 4588 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 IGHV3-15A0A0B4J1V0 119 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 IGSF23A1L1A6 192 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR5H14A6NHG9 310 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SLC22A20A6NK97 555 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 RNASEK-C17orf49H0YIS7 233 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SIRPB1O00241 398 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SLC9A3R1O14745 358 aaPredicted RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SLC25A20O43772 301 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 COX7A2P2O60397 106 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 UPK1BO75841 260 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 HBE1P02100 147 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 CRPP02741 224 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 GYPCP04921 128 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 GABRA1P14867 456 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 GABRG2P18507 467 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 CNTFRP26992 372 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SPAM1P38567 509 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 TNNT2P45379 298 aaPredicted RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 PSMB2P49721 201 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 RPL14P50914 215 aaKnown RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 HTD2P86397 168 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZNF90Q03938 601 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 CD164Q04900 197 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SLC38A11Q08AI6 406 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SKP2Q13309 424 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 APOFQ13790 326 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 TFDP2Q14188 446 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZMYND11Q15326 602 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SSX1Q16384 188 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 TMEM241Q24JQ0 296 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 CCDC152Q4G0S7 254 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZCWPW2Q504Y3 356 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 HSP90AB3PQ58FF7 597 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 CTSL3PQ5NE16 218 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 CCDC183Q5T5S1 534 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 C22orf42Q6IC83 251 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR2T5Q6IEZ7 315 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZNF773Q6PK81 442 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 TMED8Q6PL24 325 aaPredicted RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 SDIM1Q6ZPB5 146 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 FP248Q71RG6 208 aaPredicted RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 DPPA2Q7Z7J5 298 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 PRNTQ86SH4 94 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 RPS19BP1Q86WX3 136 aaKnown RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 NIT1Q86X76 327 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZNF619Q8N2I2 560 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR11G2Q8NGC1 345 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR8B12Q8NGG6 310 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR5AR1Q8NGP9 310 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR2T29Q8NH02 315 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 OR5K2Q8NHB8 316 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 LYPD6BQ8NI32 183 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ASZ1Q8WWH4 475 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 MBOAT7Q96N66 472 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 YPEL4Q96NS1 127 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 TMEM175Q9BSA9 504 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 PECRQ9BY49 303 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ARL6Q9H0F7 186 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 C8orf4Q9NR00 106 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 RPUSD1Q9UJJ7 312 aaKnown RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 BTRCQ9Y297 605 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 PHLDA3Q9Y5J5 127 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 ZNF706Q9Y5V0 76 aaPredicted RBP-0.46□□□□□ -2.48
COPB1-212ENST00000534771 GLI3P10071 1580 aa-0.46□□□□□ -2.48
COPB1-212ENST00000534771 DHRS12A0PJE2 317 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 ZNF705FA8MVS1 300 aaPredicted RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 UPK1AO00322 258 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SPOPO43791 374 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 NDUFS5O43920 106 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SOX14O95416 240 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 CST1P01037 141 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 HSPA5P11021 654 aaKnown RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 TNNI1P19237 187 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 MX1P20591 662 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 GLRA2P23416 452 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 MTPNP58546 118 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 RPL10AP62906 217 aaKnown RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 EMX1Q04741 257 aaPredicted RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 WDR43Q15061 677 aaKnown RBP eCLIP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 LRRC75BQ2VPJ9 315 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 ZNF404Q494X3 552 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 FAM229BQ4G0N7 80 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 CFAP157Q5JU67 520 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 TMEM215Q68D42 235 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 RWDD4Q6NW29 188 aaKnown RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 WDR82Q6UXN9 313 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SLC16A14Q7RTX9 510 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 LINC00596Q86U02 117 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 LRRC28Q86X40 367 aaPredicted RBP-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SLC7A5P1Q8MH63 180 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 DYNAPQ8N1N2 210 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 SLC35F6Q8N357 371 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 FER1L6-AS1Q8NA97 138 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 C15orf53Q8NAA6 179 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 TCP10LQ8TDR4 215 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 ACMSDQ8TDX5 336 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 ASB17Q8WXJ9 295 aa-0.47□□□□□ -2.48
COPB1-212ENST00000534771 RAB1CQ92928 201 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms