RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PAHP00439 452 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 IGKV1D-12P01611 117 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 RBP4P02753 201 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 PIPP12273 146 aaPredicted RBP11.42□□□□□ -0.58
SF3B2-215ENST00000534307 ZNF20P17024 532 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 BCL3P20749 454 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 MTCP1P56278 107 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 PDZK1IP1Q13113 114 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 AANATQ16613 207 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 LHFPL2Q6ZUX7 228 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 FAM58AQ8N1B3 248 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 OR52N4Q8NGI2 321 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 OR52I1Q8NGK6 324 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 EMG1Q92979 244 aaKnown RBP11.42□□□□□ -0.58
SF3B2-215ENST00000534307 SNX22Q96L94 193 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 RDH12Q96NR8 316 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 JAM3Q9BX67 310 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 HEXA-AS1Q9H8Q6 139 aa11.42□□□□□ -0.58
SF3B2-215ENST00000534307 hCG_1809904A0A1W2PP81 198 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 A0A1W2PPE2 198 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 A0A1W2PR64 198 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 A0A1W2PRV1 198 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 FAM90A8PA6NJQ4 464 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 PSPNO60542 156 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 INMTO95050 263 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 LIMS3P0CW19 117 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 LIMS4P0CW20 117 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 POU3F4P49335 361 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 BMXP51813 675 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 MEF2CQ06413 473 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-215ENST00000534307 SMN1Q16637 294 aaKnown RBP11.41□□□□□ -0.58
SF3B2-215ENST00000534307 ZSCAN26Q16670 478 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 SPIN3Q5JUX0 258 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 LPCAT4Q643R3 524 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 GDPD3Q7L5L3 318 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 PARP16Q8N5Y8 322 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 OR13C3Q8NGS6 347 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 OR13C9Q8NGT0 318 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 MRPL48Q96GC5 212 aaKnown RBP11.41□□□□□ -0.58
SF3B2-215ENST00000534307 MYCBPQ99417 103 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-215ENST00000534307 HMG20AQ9NP66 347 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 SMPD3Q9NY59 655 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-215ENST00000534307 ZNF281Q9Y2X9 895 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 RPL36Q9Y3U8 105 aaKnown RBP11.41□□□□□ -0.58
SF3B2-215ENST00000534307 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
SF3B2-215ENST00000534307 TMEM212A6NML5 194 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 ODF3BA8MYP8 253 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 H3BUX3 64 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 KDM4BO94953 1096 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 ALX3O95076 343 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 ZNF728P0DKX0 622 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 COX7A1P24310 79 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 PAX6P26367 422 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 DUSP1P28562 367 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 TGFBR2P37173 567 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 EDDM3BP56851 147 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 MRPL28Q13084 256 aaKnown RBP11.4□□□□□ -0.58
SF3B2-215ENST00000534307 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 DHRS7BQ6IAN0 325 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-215ENST00000534307 ZNF782Q6ZMW2 699 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-215ENST00000534307 PIFOQ8TCI5 191 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 RPS4Y2Q8TD47 263 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 RFT1Q96AA3 541 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 SPACA5Q96QH8 159 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 SSX3Q99909 188 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 PDCD1LG2Q9BQ51 273 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 ZCCHC4Q9H5U6 513 aa11.4□□□□□ -0.58
SF3B2-215ENST00000534307 FGF20Q9NP95 211 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-215ENST00000534307 MEX3AA1L020 520 aaKnown RBP11.39□□□□□ -0.59
SF3B2-215ENST00000534307 VGLL3A8MV65 326 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 BAG2O95816 211 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 CYB5AP00167 134 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 RPSAP08865 295 aaKnown RBP11.39□□□□□ -0.59
SF3B2-215ENST00000534307 CCDC159P0C7I6 412 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 IGHV1-8P0DP01 117 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 CALCBP10092 127 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 PRKACAP17612 351 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 LMO1P25800 156 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 OR3A1P47881 315 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 ZP1P60852 638 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 KLHL22Q53GT1 634 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 LDLRAD2Q5SZI1 272 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 ZNF691Q5VV52 312 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 ZNF626Q68DY1 528 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 ASPHD2Q6ICH7 369 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 ZNF529Q6P280 563 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 LHFPL4Q7Z7J7 247 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 SAXO1Q8IYX7 474 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 OR4S1Q8NGB4 309 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 OR11H6Q8NGC7 330 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 OR5D18Q8NGL1 313 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 OR5AK2Q8NH90 309 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 PPP1R35Q8TAP8 253 aa11.39□□□□□ -0.59
SF3B2-215ENST00000534307 HAVCR2Q8TDQ0 301 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms