RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNRF1Q8ND25 227 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 KLHL30-AS1Q8NEE0 82 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 DNAAF1Q8NEP3 725 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 OR4X2Q8NGF9 303 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ACMSDQ8TDX5 336 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ACOT11Q8WXI4 607 aaPredicted RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ERGIC1Q969X5 290 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RASD2Q96D21 266 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF583Q96ND8 569 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RBP7Q96R05 134 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 SORT1Q99523 831 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 MCHR1Q99705 422 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CIB1Q99828 191 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 KCTD14Q9BQ13 255 aaPredicted RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 PRSS27Q9BQR3 290 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM43Q9BTV4 400 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CCDC28BQ9BUN5 200 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 DGCR6LQ9BY27 220 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 GPR61Q9BZJ8 451 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CTDSP1Q9GZU7 261 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RERGLQ9H628 205 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 EFCAB1Q9HAE3 211 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 TPT1P8Q9HAU6 139 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 PLGRKTQ9HBL7 147 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 BCL2L10Q9HD36 194 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ABCB10Q9NRK6 738 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CCDC167Q9P0B6 97 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 NDUFA13Q9P0J0 144 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 P2RX2Q9UBL9 471 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC25A10Q9UBX3 287 aaPredicted RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 WARS2Q9UGM6 360 aaKnown RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 DAPK2Q9UIK4 370 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RAB26Q9ULW5 256 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 IFT52Q9Y366 437 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RAP2CQ9Y3L5 183 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 AP4S1Q9Y587 144 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 N6AMT1Q9Y5N5 214 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 SNX5Q9Y5X3 404 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 FAT1Q14517 4588 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 IGKV1D-17A0A075B6S4 117 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A087WXM4 84 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 DHRS12A0PJE2 317 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 PSMB11A5LHX3 300 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR6C68A6NDL8 312 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 PGPEP1LA6NFU8 196 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SDHDO14521 159 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RFXANKO14593 260 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 LDLRAD4O15165 306 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 AKR7A2O43488 359 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 PTBP3O95758 552 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SCGB1D1O95968 90 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 IL1AP01583 271 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 LCATP04180 440 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ACAA1P09110 424 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OCM2P0CE71 109 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OCMP0CE72 109 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 IGHV4-30-4P0DP06 118 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 COX5BP10606 129 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC2A1P11166 492 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 PIPP12273 146 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 NCK1P16333 377 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ATP6V1B2P21281 511 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TUBG1P23258 451 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CNTFRP26992 372 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ARL3P36405 182 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 GUCA1AP43080 201 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 YAP1P46937 504 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR3A4PP47883 348 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SOX2P48431 317 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CENPAP49450 140 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 EIF2B2P49770 351 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CCR9P51686 369 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RGS8P57771 180 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL27P61353 136 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 NAA20P61599 178 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 EWSR1Q01844 656 aaKnown RBP eCLIP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF92Q03936 586 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CBX3Q13185 183 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF273Q14593 569 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 IL13RA2Q14627 380 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RGNQ15493 299 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 DUSP7Q16829 419 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 MICBQ29980 383 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SNAI3Q3KNW1 292 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 LRRC10Q5BKY1 277 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SAMD4BQ5PRF9 694 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 UTF1Q5T230 341 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 GPR107Q5VW38 600 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 STUMQ69YW2 141 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CFAP161Q6P656 301 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 DHRS4L2Q6PKH6 230 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 EPGNQ6UW88 154 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 WDR82Q6UXN9 313 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 BAIAP2L2Q6UXY1 529 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ACP7Q6ZNF0 438 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CFAP77Q6ZQR2 320 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZBTB49Q6ZSB9 765 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 PGAP1Q75T13 922 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 UTS2BQ765I0 119 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms