RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 EDDM3BP56851 147 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 ACTG1P63261 375 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 Q499Y3 187 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 SPIN3Q5JUX0 258 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 SAXO1Q8IYX7 474 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 NANOGP1Q8N7R0 232 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 OR4M1Q8NGD0 313 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 PPP1R35Q8TAP8 253 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 ZFAND2BQ8WV99 257 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 TNFAIP8L1Q8WVP5 186 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 CNBD2Q96M20 576 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 S100A13Q99584 98 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 CCDC90BQ9GZT6 254 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 METTL8Q9H825 291 aaKnown RBP11.03□□□□□ -0.64
CAPN1-227ENST00000533909 RHOFQ9HBH0 211 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 EXOSC4Q9NPD3 245 aaKnown RBP11.03□□□□□ -0.64
CAPN1-227ENST00000533909 SIRT7Q9NRC8 400 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 FKBP14Q9NWM8 211 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 GSTK1Q9Y2Q3 226 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 FAM96BQ9Y3D0 163 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 SIRT4Q9Y6E7 314 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-227ENST00000533909 CUBNO60494 3623 aa11.03□□□□□ -0.64
CAPN1-227ENST00000533909 IGHV1-69DA0A0B4J2H0 117 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 CENPVL3A0A0U1RRI6 287 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 K7N7A8 449 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 M0R1W7 72 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 RGS10O43665 173 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 IGHV1-69P01742 117 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 MAPK3P27361 379 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-227ENST00000533909 DUSP1P28562 367 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 BMXP51813 675 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 SCN1BQ07699 218 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 EDDM3AQ14507 147 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 RSU1Q15404 277 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 MED22Q15528 200 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 DDI2Q5TDH0 399 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 RUSC1-AS1Q66K80 236 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 NCR3LG1Q68D85 454 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 C1orf122Q6ZSJ8 110 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 C9orf139Q6ZV77 190 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 PHC2Q8IXK0 858 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 OR5D13Q8NGL4 314 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 OR13C5Q8NGS8 318 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 RPS4Y2Q8TD47 263 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 THRSPQ92748 146 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 CDCA4Q9BXL8 241 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 Q9H521 79 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 HMG20AQ9NP66 347 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 TMEM138Q9NPI0 162 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 C19orf12Q9NSK7 152 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 BLOC1S6Q9UL45 172 aa11.02□□□□□ -0.65
CAPN1-227ENST00000533909 SIRPB1O00241 398 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 KDM4BO94953 1096 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 ZNF44P15621 663 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 BDKRB2P30411 391 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 BDH1Q02338 343 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 SPHARQ15513 63 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 GRK1Q15835 563 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 RNLSQ5VYX0 342 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 OR8H2Q8N162 312 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 ZNF485Q8NCK3 441 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 OR52N4Q8NGI2 321 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 OR51A2Q8NGJ7 313 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 SPATA3Q8NHX4 192 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 SLC25A28Q96A46 364 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 SNX22Q96L94 193 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 OR14A2Q96R54 314 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 ZMAT3Q9HA38 289 aaKnown RBP11.01□□□□□ -0.65
CAPN1-227ENST00000533909 IL36RNQ9UBH0 155 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 RAB26Q9ULW5 256 aa11.01□□□□□ -0.65
CAPN1-227ENST00000533909 TRBV5-5A0A0J9YX44 114 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 A0A1W2PPK0 400 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 FUOMA2VDF0 154 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 DNAJC9-AS1A6NH13 148 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 PAHP00439 452 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 HSMCR30P0CW71 290 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 ZNF93P35789 620 aaPredicted RBP11□□□□□ -0.65
CAPN1-227ENST00000533909 MTNR1BP49286 362 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 UBA52P62987 128 aaKnown RBP11□□□□□ -0.65
CAPN1-227ENST00000533909 ZNF146Q15072 292 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 DEFB112Q30KQ8 113 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 TMEM200BQ69YZ2 307 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11□□□□□ -0.65
CAPN1-227ENST00000533909 FAM216AQ8WUB2 273 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 PGLYRP3Q96LB9 341 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 DUX5Q96PT3 197 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 NR1H4Q96RI1 486 aaPredicted RBP11□□□□□ -0.65
CAPN1-227ENST00000533909 CHST6Q9GZX3 395 aa11□□□□□ -0.65
CAPN1-227ENST00000533909 PAK1IP1Q9NWT1 392 aaPredicted RBP11□□□□□ -0.65
CAPN1-227ENST00000533909 IGKV1-12A0A0C4DH73 117 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 A0A1W2PRD5 423 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 A0A1W2PRF3 423 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 A0A1W2PRM7 423 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 hADV38S2A0JD32 116 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 GABRPO00591 440 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 DEGS1O15121 323 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 ZNF737O75373 536 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 IGKV1D-12P01611 117 aa10.99□□□□□ -0.65
CAPN1-227ENST00000533909 CSTBP04080 98 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms