RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF93P35789 620 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 OR3A4PP47883 348 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 CAV3P56539 151 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 TRAM1Q15629 374 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 LRRC10Q5BKY1 277 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 CEACAM19Q7Z692 300 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 LYPD6Q86Y78 171 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 ZNF561Q8N587 486 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 ELL3Q9HB65 397 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 SLC25A10Q9UBX3 287 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 RPUSD1Q9UJJ7 312 aaKnown RBP9.92□□□□□ -0.82
SSBP3-214ENST00000533209 WNK2Q9Y3S1 2297 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 JMJD1CQ15652 2540 aa9.92□□□□□ -0.82
SSBP3-214ENST00000533209 RGS9O75916 674 aaPredicted RBP9.91□□□□□ -0.82
SSBP3-214ENST00000533209 ADRA2CP18825 462 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 PSMB9P28065 219 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 DUSP1P28562 367 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 SNU13P55769 128 aaKnown RBP9.91□□□□□ -0.82
SSBP3-214ENST00000533209 FABP5Q01469 135 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 COL10A1Q03692 680 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 ZNF146Q15072 292 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 SPIN3Q5JUX0 258 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 ELP2Q6IA86 826 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 BTNL3Q6UXE8 466 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 LRRTM1Q86UE6 522 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 CDH26Q8IXH8 852 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 LY6G5BQ8NDX9 201 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 TMEM185AQ8NFB2 350 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 Q8NFD4 153 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 OR10K1Q8NGX5 313 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 C8orf46Q8TAG6 207 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 PHYHIPQ92561 330 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 FCGR1BQ92637 280 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 DCTN5Q9BTE1 182 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 MRI1Q9BV20 369 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 FAM192AQ9GZU8 254 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 TCF7L1Q9HCS4 588 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 NDUFB11Q9NX14 153 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 AUP1Q9Y679 476 aa9.91□□□□□ -0.82
SSBP3-214ENST00000533209 SVEP1Q4LDE5 3571 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 K7N7A8 449 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 ZNF737O75373 536 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 CDRT1O95170 752 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 TNFAIP8O95379 198 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 HAND1O96004 215 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 FSHBP01225 129 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 LIPFP07098 398 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 CHRM2P08172 466 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 FAM157CP0CG43 387 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 NDUFB7P17568 137 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 SRMP19623 302 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 MTNR1BP49286 362 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 CAPZA1P52907 286 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 RIPPLY3P57055 190 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 FGF12P61328 243 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 RSU1Q15404 277 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 HSD17B12Q53GQ0 312 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 CD200R1LQ6Q8B3 271 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 FIP1L1Q6UN15 594 aaKnown RBP9.9□□□□□ -0.82
SSBP3-214ENST00000533209 JAGN1Q8N5M9 183 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 NKAIN3Q8N8D7 197 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 ASCC1Q8N9N2 400 aaKnown RBP9.9□□□□□ -0.82
SSBP3-214ENST00000533209 PNLDC1Q8NA58 520 aaKnown RBP9.9□□□□□ -0.82
SSBP3-214ENST00000533209 H1FXQ92522 213 aaKnown RBP9.9□□□□□ -0.82
SSBP3-214ENST00000533209 CNTD2Q9H8S5 307 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 ING4Q9UNL4 249 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 GSTK1Q9Y2Q3 226 aa9.9□□□□□ -0.82
SSBP3-214ENST00000533209 TMEM82A0PJX8 343 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 MEGF11A6BM72 1044 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 CCRL2O00421 344 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 SH2D1BO14796 132 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 ARL6IP5O75915 188 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 HTR3BO95264 441 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 OR2H2O95918 312 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 TK1P04183 234 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 PPIAL4GP0DN37 164 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 CD37P11049 281 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 SRD5A1P18405 259 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 SRP14P37108 136 aaKnown RBP9.89□□□□□ -0.83
SSBP3-214ENST00000533209 BMXP51813 675 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 Q6P435 159 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 C17orf107Q6ZR85 190 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 OR4D6Q8NGJ1 314 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 OR51T1Q8NGJ9 327 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 MUL1Q969V5 352 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 POM121Q96HA1 1249 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 SNX22Q96L94 193 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 DMRTB1Q96MA1 342 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 C1orf147Q96MC9 270 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-214ENST00000533209 FAM234AQ9H0X4 552 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 SIRPDQ9H106 197 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 METTL9Q9H1A3 318 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 ZNF696Q9H7X3 374 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 EXOSC4Q9NPD3 245 aaKnown RBP9.89□□□□□ -0.83
SSBP3-214ENST00000533209 GLS2Q9UI32 602 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 MRPS28Q9Y2Q9 187 aaKnown RBP9.89□□□□□ -0.83
SSBP3-214ENST00000533209 DOCK11Q5JSL3 2073 aa9.89□□□□□ -0.83
SSBP3-214ENST00000533209 TRBV23-1A0A0A0MS06 115 aa9.88□□□□□ -0.83
SSBP3-214ENST00000533209 TRDV1A0A1B0GX56 115 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms