RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ENTHD1Q8IYW4 607 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ZNF676Q8N7Q3 588 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 OR11H6Q8NGC7 330 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 NDNFQ8TB73 568 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 PP6455Q8WZ26 134 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 EME1Q96AY2 570 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 C10orf35Q96D05 121 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ZNF702PQ9H963 129 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 RBFOX1Q9NWB1 397 aaKnown RBP14.39□□□□□ -0.11
PCF11-206ENST00000533018 IMPAD1Q9NX62 359 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 IL36RNQ9UBH0 155 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 GLS2Q9UI32 602 aa14.39□□□□□ -0.11
PCF11-206ENST00000533018 ODF3BA8MYP8 253 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 F2RL2O00254 374 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 FBXO24O75426 580 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 IGHA1P01876 353 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 PRKACAP17612 351 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 BCL3P20749 454 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 NPBWR2P48146 333 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 ZNF85Q03923 595 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 SLC34A1Q06495 639 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 TMED1Q13445 227 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 FAM58AQ8N1B3 248 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 FGGYQ96C11 551 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 CENPNQ96H22 339 aaPredicted RBP14.38□□□□□ -0.11
PCF11-206ENST00000533018 OR5M11Q96RB7 305 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 GABARAPL3Q9BY60 117 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 PRSS22Q9GZN4 317 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 NOTCH3Q9UM47 2321 aa14.38□□□□□ -0.11
PCF11-206ENST00000533018 A6NDX4 124 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 H3BUI4 141 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 CIB2O75838 187 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 ATP5HO75947 161 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 KIR3DL2P43630 455 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 TMEM244Q5VVB8 128 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 OR52N4Q8NGI2 321 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 ADAT3Q96EY9 351 aaPredicted RBP14.37□□□□□ -0.11
PCF11-206ENST00000533018 CDCA4Q9BXL8 241 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 SESN1Q9Y6P5 492 aa14.37□□□□□ -0.11
PCF11-206ENST00000533018 DAPL1A0PJW8 107 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 MEGF11A6BM72 1044 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 SIRPB1O00241 398 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 PSPNO60542 156 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 CD28P10747 220 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 JUNBP17275 347 aaPredicted RBP14.36□□□□□ -0.11
PCF11-206ENST00000533018 PRKACBP22694 351 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 AZGP1P25311 298 aaKnown RBP14.36□□□□□ -0.11
PCF11-206ENST00000533018 LDLRAD2Q5SZI1 272 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 TCF23Q7RTU1 214 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 DNAAF1Q8NEP3 725 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 OR4S1Q8NGB4 309 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 OR2G2Q8NGZ5 317 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 RFT1Q96AA3 541 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 OSBPL10Q9BXB5 764 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 SERTAD4Q9NUC0 356 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 GSTK1Q9Y2Q3 226 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 ORC6Q9Y5N6 252 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 LINC00312Q9Y6C7 94 aa14.36□□□□□ -0.11
PCF11-206ENST00000533018 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 IGKV1-9A0A0C4DH69 117 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 TRBV2A0A0J9YWF9 115 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 MGST3O14880 152 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 ENTPD6O75354 484 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 ATF1P18846 271 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 EMX1Q04741 257 aaPredicted RBP14.35□□□□□ -0.11
PCF11-206ENST00000533018 ZNF91Q05481 1191 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 SCN1BQ07699 218 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 MINOS1Q5TGZ0 78 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 LHFPL2Q6ZUX7 228 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 TRUB1Q8WWH5 349 aaKnown RBP14.35□□□□□ -0.11
PCF11-206ENST00000533018 RNFT2Q96EX2 444 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 CLEC7AQ9BXN2 247 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 NEK6Q9HC98 313 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 FRRS1LQ9P0K9 344 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 MINOS1-NBL1R4GNA1 71 aa14.35□□□□□ -0.11
PCF11-206ENST00000533018 SH2D1BO14796 132 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 PRB2P02812 416 aaPredicted RBP14.34□□□□□ -0.11
PCF11-206ENST00000533018 HTR1AP08908 422 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 HTR1DP28221 377 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 ISL1P61371 349 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 BLCAPP62952 87 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 PDZK1IP1Q13113 114 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 ZNF146Q15072 292 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 BEAN1Q3B7T3 259 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 SPIN3Q5JUX0 258 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 KCTD20Q7Z5Y7 419 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 Q8N2B8 174 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 R3HDM4Q96D70 268 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 OPALINQ96PE5 141 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 EXOSC4Q9NPD3 245 aaKnown RBP14.34□□□□□ -0.11
PCF11-206ENST00000533018 FAM53CQ9NYF3 392 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 PCDHGB5Q9Y5G0 923 aa14.34□□□□□ -0.11
PCF11-206ENST00000533018 TRGV10A0A0A0MS01 117 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 J3QLW9 94 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 SLC16A6O15403 523 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 ZNF19P17023 458 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 VDAC2P45880 294 aaPredicted RBP14.33□□□□□ -0.12
PCF11-206ENST00000533018 P2RX3P56373 397 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms