RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 UCHL3P15374 230 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 AGTR1P30556 359 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 PYCR1P32322 319 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 GFERP55789 205 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 EBPQ15125 230 aaKnown RBP3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 SMUG1Q53HV7 270 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 TCTEX1D4Q5JR98 221 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 MDP1Q86V88 176 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 LRRC25Q8N386 305 aaPredicted RBP3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 CYGBQ8WWM9 190 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 EXOSC8Q96B26 276 aaKnown RBP3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 PPCDCQ96CD2 204 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 KCNS1Q96KK3 526 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 DOK1Q99704 481 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM243Q9BU79 118 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 DEFB126Q9BYW3 111 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 FBXL15Q9H469 300 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 VPS29Q9UBQ0 182 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 POLR1DQ9Y2S0 133 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 PRSS21Q9Y6M0 314 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 RLFQ13129 1914 aa3.13□□□□□ -1.91
AC055878.1-201ENST00000531858 NCOA1Q15788 1441 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TRAV19A0A0A6YYK7 116 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 IGHV3-66A0A0C4DH42 116 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 MYBPHLA2RUH7 354 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 EPOPA6NHQ4 379 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM238C9JI98 176 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CCDC22O60826 627 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SUPT3HO75486 399 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CIAO1O76071 339 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SUPT7LO94864 414 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CA2P00918 260 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 IGKV5-2P06315 115 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SNRPAP09012 282 aaKnown RBP3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 LINC00614P0C842 121 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 MIPP30301 263 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CBX5P45973 191 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 GNG10P50151 68 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CRIP2P52943 208 aaPredicted RBP3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 PFN3P60673 137 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ADIGQ0VDE8 80 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM183BQ1AE95 376 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 KRTAP27-1Q3LI81 207 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF404Q494X3 552 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CLLU1OSQ5K130 101 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 OPN5Q6U736 354 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 Q6ZSR6 202 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ITPRIPQ8IWB1 547 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 C11orf53Q8IXP5 236 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM183AQ8IXX5 376 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF440Q8IYI8 595 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC25A45Q8N413 288 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC35G3Q8N808 338 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF680Q8NEM1 530 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 PXT1Q8NFP0 134 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC37A2Q8TED4 501 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SRSF12Q8WXF0 261 aaKnown RBP3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CCL17Q92583 94 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 MARC2Q969Z3 335 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 PTX4Q96A99 478 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM159Q96B96 161 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC35E1Q96K37 410 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ZIM3Q96PE6 472 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CAMK2N2Q96S95 79 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 PLEKHF1Q96S99 279 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TIMM17AQ99595 171 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 SOSTQ9BQB4 213 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF649Q9BS31 505 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 MRPL20Q9BYC9 149 aaKnown RBP3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 CHST5Q9GZS9 411 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 METTL17Q9H7H0 456 aaPredicted RBP3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TAS2R5Q9NYW4 299 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 TRAPPC4Q9Y296 219 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ASTN1O14525 1302 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF532Q9HCE3 1301 aa3.12□□□□□ -1.91
AC055878.1-201ENST00000531858 DOCK7Q96N67 2140 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 SCN5AQ14524 2016 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 CLDN24A6NM45 220 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF705GA8MUZ8 300 aaPredicted RBP3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 PRSS44E7EML9 344 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 SPAG7O75391 227 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 TNFSF13O75888 250 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 GABARAPO95166 117 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC25A14O95258 325 aaPredicted RBP3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 IGLV2-23P01705 113 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 MT-ND4P03905 459 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 FABP1P07148 127 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 SPNP16150 400 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ME2P23368 584 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 PRTN3P24158 256 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 DDTP30046 118 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 POLR2IP36954 125 aaKnown RBP3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 H2BFSP57053 126 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 TAS2R43P59537 309 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 RAB5BP61020 215 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ERCC8Q13216 396 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 EDDM3AQ14507 147 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF235Q14590 738 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 POU6F1Q14863 301 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 MAPK14Q16539 360 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms