RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 HES3Q5TGS1 186 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ZNF383Q8NA42 475 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 OR13G1Q8NGZ3 307 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 CRISPLD2Q9H0B8 497 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 RHOFQ9HBH0 211 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 SIRT7Q9NRC8 400 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 TMED3Q9Y3Q3 217 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 RER1O15258 196 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 FGF9P31371 208 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 DEGS2Q6QHC5 323 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ZNF66Q6ZN08 573 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 MSRB3Q8IXL7 192 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 GPR87Q9BY21 358 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 OR5V1Q9UGF6 321 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ELOA3CA0A087WX78 387 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 CT62P0C5K7 136 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ZNF32P17041 273 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ERVFC1-1P60608 527 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 CLLU1Q5K131 121 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 FAM27D1Q5T7N8 215 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 RNASEKQ6P5S7 137 aaKnown RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 PECRQ9BY49 303 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 MMP26Q9NRE1 261 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 QSER1Q2KHR3 1735 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 DRD3P35462 400 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 PMP22Q01453 160 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 PWWP2BQ6NUJ5 590 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 TMEM108Q6UXF1 575 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 MBD3L1Q8WWY6 194 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 RPEQ96AT9 228 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ZNF764Q96H86 408 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 TMEM147Q9BVK8 224 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 LHX9Q9NQ69 397 aa7.55□□□□□ -1.2
CTNND1-221ENST00000529873 ZNF275Q9NSD4 429 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 SIRT3Q9NTG7 399 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-221ENST00000529873 DEFB108AA8MXU0 73 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 M0R296 226 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PPIHO43447 177 aaKnown RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 WNT1P04628 370 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PGA3P0DJD8 388 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 HLXQ14774 488 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 OR4F17Q8NGA8 305 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 OR6X1Q8NH79 312 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 NUBPLQ8TB37 319 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 C5orf67F2Z3F1 127 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 FCGR3BO75015 233 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 OPRK1P41145 380 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 CDKN2AP42771 156 aaKnown RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PCBP3P57721 371 aaKnown RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 RHBDD2Q6NTF9 364 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 Q6ZN92 141 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 MYPOPQ86VE0 399 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 NEURL2Q9BR09 285 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 SF3B5Q9BWJ5 86 aaKnown RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 OR2T8A6NH00 312 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 AKR7A2O43488 359 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 IGHA2P01877 340 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 RELQ04864 619 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PHYHIPLQ96FC7 376 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 RAB40CQ96S21 281 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 CD82P27701 267 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 G6PCP35575 357 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 TEX30Q5JUR7 227 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 XAF1Q6GPH4 301 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 ZNF429Q86V71 674 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PRSS3P2Q8NHM4 247 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 UQCC1Q9NVA1 299 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PSG11Q9UQ72 335 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 SLC38A11Q08AI6 406 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 DMRTC1Q5HYR2 192 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 VASH2Q86V25 355 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 BCL2L2Q92843 193 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-221ENST00000529873 PIMREGQ9BSJ6 248 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 SEC11CQ9BY50 192 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 TMPRSS13Q9BYE2 586 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 R4GN57 208 aa7.54□□□□□ -1.2
CTNND1-221ENST00000529873 CRXO43186 299 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-221ENST00000529873 CST4P01036 141 aa7.53□□□□□ -1.2
CTNND1-221ENST00000529873 PDCD1Q15116 288 aa7.53□□□□□ -1.2
CTNND1-221ENST00000529873 ATP6V1FQ16864 119 aa7.53□□□□□ -1.2
CTNND1-221ENST00000529873 RIPPLY2Q5TAB7 128 aa7.53□□□□□ -1.2
CTNND1-221ENST00000529873 VN1R4Q7Z5H5 301 aa7.53□□□□□ -1.2
CTNND1-221ENST00000529873 CNTD2Q9H8S5 307 aa7.53□□□□□ -1.2
CTNND1-221ENST00000529873 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms