RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 RSU1Q15404 277 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 GGNBP1Q5YKI7 109 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 HAGHLQ6PII5 290 aaPredicted RBP13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 MDS2Q8NDY4 140 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 FNDC9Q8TBE3 224 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 DYRK2Q92630 601 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 RHOFQ9HBH0 211 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 CRLF2Q9HC73 371 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
TM9SF1-208ENST00000529332 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 NME2P1O60361 137 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 DEDDO75618 318 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 SP1P08047 785 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 NME2P22392 152 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 RPL12P30050 165 aaKnown RBP13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 CAV2P51636 162 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 CCL11P51671 97 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 FLI1Q01543 452 aaPredicted RBP13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 FOXO1Q12778 655 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 TMEM268Q5VZI3 342 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 DHRS7BQ6IAN0 325 aaPredicted RBP13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 GPR137CQ8N3F9 429 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 OR1F12Q8NHA8 337 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 SULT4A1Q9BR01 284 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 SEC11CQ9BY50 192 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 ZNF552Q9H707 407 aaPredicted RBP13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 NDRG3Q9UGV2 375 aa13.65□□□□□ -0.22
TM9SF1-208ENST00000529332 FREM2Q5SZK8 3169 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 K7EPK0 472 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 KLK10O43240 276 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 MED6O75586 246 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 DEFB109BQ30KR1 87 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 BRICD5Q6PL45 260 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 YRDCQ86U90 279 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 FAM71E2Q8N5Q1 922 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 AKR7LQ8NHP1 331 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 NRIP2Q9BQI9 281 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 SCNM1Q9BWG6 230 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 FBXL17Q9UF56 701 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 HSF4Q9ULV5 492 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 EDARQ9UNE0 448 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 AMDHD2Q9Y303 409 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 NCKAP5O14513 1909 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 IGKV1-12A0A0C4DH73 117 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 LINC01387J3KSC0 135 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 IGKV1D-12P01611 117 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 LCATP04180 440 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 FCGR3AP08637 254 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 CHATP28329 748 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 FCGR2CP31995 323 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 SULT1A2P50226 295 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 PIGPP57054 158 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 RAC3P60763 192 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 SP6Q3SY56 376 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 TMEM178AQ8NBL3 297 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 CPNE2Q96FN4 548 aaPredicted RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 SF3B5Q9BWJ5 86 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 TMEM38BQ9NVV0 291 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 RCC2Q9P258 522 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 PRELID3BQ9Y3B1 194 aa13.64□□□□□ -0.23
TM9SF1-208ENST00000529332 PINLYPA6NC86 204 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 ZNF850A8MQ14 1090 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 FBXO24O75426 580 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 CST4P01036 141 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 CST2P09228 141 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 RFPL3SP0C7P2 107 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 B4GALT1P15291 398 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 ZNF32P17041 273 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 ID4P47928 161 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 EIF5AP63241 154 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 PLGLB1Q02325 96 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 KRTAP27-1Q3LI81 207 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 DHRS11Q6UWP2 260 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 ASCL4Q6XD76 172 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 NAXEQ8NCW5 288 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 OR10Z1Q8NGY1 313 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 TOMM40LQ969M1 308 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 HES7Q9BYE0 225 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 ZNF703Q9H7S9 590 aaPredicted RBP13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 LSM5Q9Y4Y9 91 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 FAM221AA4D161 298 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 OR6C6A6NF89 314 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 ZNF716A6NP11 495 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 H7C2Y5 167 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 GEMIN2O14893 280 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 SNAPINO95295 136 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 IFNA21P01568 189 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 DTYMKP23919 212 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 RBP2P50120 134 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 TMEM33P57088 247 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 CNN3Q15417 329 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 TMEM42Q69YG0 159 aa13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 EIF5AL1Q6IS14 154 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-208ENST00000529332 BTNL8Q6UX41 500 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms