RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ACBD7Q8N6N7 88 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 OR2G2Q8NGZ5 317 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 BORCS8Q96FH0 119 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 AJUBAQ96IF1 538 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 CEP19Q96LK0 163 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 FRRS1LQ9P0K9 344 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 GNG8Q9UK08 70 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 IGKV1-27A0A075B6S5 117 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 LOC107986453A0A1B0GWG9 222 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 SLC16A6O15403 523 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 MPZL2O60487 215 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF737O75373 536 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 CD28P10747 220 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 GABRB1P18505 474 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 PRKACBP22694 351 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 KIR3DL2P43630 455 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 CEBPDP49716 269 aaPredicted RBP8.51□□□□□ -1.05
CPSF1-203ENST00000527916 RBP2P50120 134 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 ATP1B3P54709 279 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 ERVFRD-1P60508 538 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 PRB3Q04118 309 aaPredicted RBP8.51□□□□□ -1.05
CPSF1-203ENST00000527916 MEF2CQ06413 473 aaPredicted RBP8.51□□□□□ -1.05
CPSF1-203ENST00000527916 DOC2BQ14184 412 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 LRRC75BQ2VPJ9 315 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 TP53I3Q53FA7 332 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 ENTHD1Q8IYW4 607 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 RDH10Q8IZV5 341 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 PNKDQ8N490 385 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 TRMT10AQ8TBZ6 339 aaKnown RBP8.51□□□□□ -1.05
CPSF1-203ENST00000527916 SPSB1Q96BD6 273 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 RNFT2Q96EX2 444 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 MRPL48Q96GC5 212 aaKnown RBP8.51□□□□□ -1.05
CPSF1-203ENST00000527916 SNX22Q96L94 193 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 MBOAT4Q96T53 435 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 CITED2Q99967 270 aaPredicted RBP8.51□□□□□ -1.05
CPSF1-203ENST00000527916 C9orf16Q9BUW7 83 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 RHOFQ9HBH0 211 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
CPSF1-203ENST00000527916 IGKV1-9A0A0C4DH69 117 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 WI2-2373I1.2A0A1W2PRP0 233 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 FAM90A8PA6NJQ4 464 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 F8VVB4 439 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 F8VWA3 439 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 C3orf84H3BNL1 204 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ANGPTL7O43827 346 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 DUS4LO95620 317 aaKnown RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 CYB5AP00167 134 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 MT-ND2P03891 347 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 HTR1AP08908 422 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ATF1P18846 271 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 DLX6P56179 175 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 OR12D2P58182 307 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 NANOS3P60323 173 aaKnown RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ACTA2P62736 377 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ACTG2P63267 376 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 SLC35A2P78381 396 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 GALEQ14376 348 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF273Q14593 569 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF146Q15072 292 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ZIK1Q3SY52 487 aaPredicted RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 LHFPL2Q6ZUX7 228 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 SLC25A26Q70HW3 274 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 OR8H2Q8N162 312 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 SYS1Q8N2H4 156 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 CBR4Q8N4T8 237 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 OR4M1Q8NGD0 313 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 RHOXF1Q8NHV9 184 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 ADAT3Q96EY9 351 aaPredicted RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 PELI1Q96FA3 418 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 RCC1LQ96I51 464 aaKnown RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 Q96MT0 163 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 NKX3-1Q99801 234 aaPredicted RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 MRPS18AQ9NVS2 196 aaKnown RBP8.5□□□□□ -1.05
CPSF1-203ENST00000527916 HHLA2Q9UM44 414 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 GMPPBQ9Y5P6 360 aa8.5□□□□□ -1.05
CPSF1-203ENST00000527916 TRBV2A0A0J9YWF9 115 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 VGLL3A8MV65 326 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 NHLRC4P0CG21 123 aaPredicted RBP8.49□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF728P0DKX0 622 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 PF4V1P10720 104 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 CCL3L1P16619 93 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 AZGP1P25311 298 aaKnown RBP8.49□□□□□ -1.05
CPSF1-203ENST00000527916 MTCP1P56278 107 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 LGALS4P56470 323 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 MRPL28Q13084 256 aaKnown RBP8.49□□□□□ -1.05
CPSF1-203ENST00000527916 PDZK1IP1Q13113 114 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 ALKBH1Q13686 389 aaKnown RBP8.49□□□□□ -1.05
CPSF1-203ENST00000527916 CRIP3Q6Q6R5 217 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 GDPD3Q7L5L3 318 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 FAM58AQ8N1B3 248 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 ASCC1Q8N9N2 400 aaKnown RBP8.49□□□□□ -1.05
CPSF1-203ENST00000527916 OR11H6Q8NGC7 330 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 HAVCR2Q8TDQ0 301 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 DPF1Q92782 380 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 SLAMF9Q96A28 289 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 FGGYQ96C11 551 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 LGALS12Q96DT0 336 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms