RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NEURL1O76050 574 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 DFFBO76075 338 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 GLDNQ6ZMI3 551 aaPredicted RBP13.12□□□□□ -0.31
USP47-207ENST00000527733 OR52B4Q8NGK2 314 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 SUN5Q8TC36 379 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 RAB27BO00194 218 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 LYPD3O95274 346 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 FAM87AP0C7U9 286 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 BCL3P20749 454 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 CEACAM6P40199 344 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 Q6ZT83 130 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 PLPPR2Q96GM1 343 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 C2orf50Q96LR7 162 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 DEPPQ9NTK1 212 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
USP47-207ENST00000527733 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
USP47-207ENST00000527733 S100A7AQ86SG5 101 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 SLC39A7Q92504 469 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 RBMXL1Q96E39 390 aaKnown RBP13.12□□□□□ -0.31
USP47-207ENST00000527733 WNT5BQ9H1J7 359 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 CSAG2Q9Y5P2 127 aa13.12□□□□□ -0.31
USP47-207ENST00000527733 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 KITLGP21583 273 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
USP47-207ENST00000527733 HSD17B11Q8NBQ5 300 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 OR10V1Q8NGI7 309 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 TAAR6Q96RI8 345 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 SPTAN1Q13813 2472 aaKnown RBP13.11□□□□□ -0.31
USP47-207ENST00000527733 RHEBQ15382 184 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 CEACAM21Q3KPI0 293 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 ZBTB37Q5TC79 503 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 OR1S2Q8NGQ3 325 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 OR14K1Q8NGZ2 314 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 SHARPINQ9H0F6 387 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 ZNF355PQ9NSJ1 428 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 SF3B6Q9Y3B4 125 aaKnown RBP13.11□□□□□ -0.31
USP47-207ENST00000527733 PCDHGA9Q9Y5G4 932 aaKnown RBP13.11□□□□□ -0.31
USP47-207ENST00000527733 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
USP47-207ENST00000527733 OR3A1P47881 315 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 FOXO1Q12778 655 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 ATPIF1Q9UII2 106 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 TGM6O95932 706 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 HAND1O96004 215 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 RPS16P62249 146 aaKnown RBP13.11□□□□□ -0.31
USP47-207ENST00000527733 GNB2P62879 340 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 PRDM14Q9GZV8 571 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 GAL3ST2Q9H3Q3 398 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 NARFLQ9H6Q4 476 aa13.11□□□□□ -0.31
USP47-207ENST00000527733 DOCK9Q9BZ29 2069 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 RTTNQ86VV8 2226 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 ZNF626Q68DY1 528 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 OR8G2PQ6IF36 304 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 MRGPRDQ8TDS7 321 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 ASB13Q8WXK3 278 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 CNTNAP3BQ96NU0 1288 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 DHRS7CA6NNS2 312 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 M0R1X1 148 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 CA11O75493 328 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 OR2F2O95006 317 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 AKR1D1P51857 326 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 BAXQ07812 192 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 C19orf57Q0VDD7 668 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 OR2F1Q13607 317 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 C17orf78Q8N4C9 275 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 OR8U8P0C7N1 319 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 EFNB2P52799 333 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 SUB1P53999 127 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP47-207ENST00000527733 CCDC28AQ8IWP9 274 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 COMMD5Q9GZQ3 224 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 KIAA1456Q9P272 454 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 MLXQ9UH92 298 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 ICE1Q9Y2F5 2266 aa13.1□□□□□ -0.31
USP47-207ENST00000527733 LY6G6EA0A0G2JKS1 128 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 SSX5O60225 188 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 C19orf48Q6RUI8 117 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 MED30Q96HR3 178 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 GCM1Q9NP62 436 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 G6PC2Q9NQR9 355 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
USP47-207ENST00000527733 PURGQ9UJV8 347 aaKnown RBP13.09□□□□□ -0.31
USP47-207ENST00000527733 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 U3KQA8 63 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 MYLKQ15746 1914 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 SHOXO15266 292 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 SLC6A1P30531 599 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 PIGYQ3MUY2 71 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 PLA2G2CQ5R387 149 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 UNQ9370/PRO34162Q6UXP9 181 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 CACFD1Q9UGQ2 172 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms