RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SPEF1Q9Y4P9 236 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 CD46P15529 392 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 PIGPP57054 158 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 PRDX4Q13162 271 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 SRSF7Q16629 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
USH1C-207ENST00000527720 IAH1Q2TAA2 248 aaPredicted RBP13.23□□□□□ -0.29
USH1C-207ENST00000527720 CEACAM21Q3KPI0 293 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 ABCA11PQ4W5N1 156 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 Q6ZS49 121 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 TMEM200AQ86VY9 491 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 MCEMP1Q8IX19 187 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 CNTNAP3BQ96NU0 1288 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 SUCNR1Q9BXA5 334 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 CNTNAP3Q9BZ76 1288 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 TMEM9BQ9NQ34 198 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 TMEM100Q9NV29 134 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 RAB19A4D1S5 217 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 KCNAB3O43448 404 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 GLP1RP43220 463 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 SLC10A1Q14973 349 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 ZDHHC23Q8IYP9 409 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 SLC38A6Q8IZM9 456 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 MOB3AQ96BX8 217 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 SYT3Q9BQG1 590 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 GSKIPQ9P0R6 139 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 STARD10Q9Y365 291 aa13.23□□□□□ -0.29
USH1C-207ENST00000527720 MSGN1A6NI15 193 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 NUDT19A8MXV4 375 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 BET1O15155 118 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 CCNOP22674 350 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 RAB1AP62820 205 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 PLP2Q04941 152 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 NAXEQ8NCW5 288 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 SLC5A7Q9GZV3 580 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 ZNF442Q9H7R0 627 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 PLSCR2Q9NRY7 297 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 WDFY4Q6ZS81 3184 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 TEX46H3BTG2 121 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 OR7C1O76099 320 aaPredicted RBP13.22□□□□□ -0.29
USH1C-207ENST00000527720 CD79AP11912 226 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 FCGR2CP31995 323 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 FOXG1P55316 489 aaPredicted RBP13.22□□□□□ -0.29
USH1C-207ENST00000527720 S100A10P60903 97 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 FGF12P61328 243 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 TMEM187Q14656 261 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 SMCO1Q147U7 214 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 BHLHE23Q8NDY6 225 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
USH1C-207ENST00000527720 DYRK2Q92630 601 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 TOMM40LQ969M1 308 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 MARS2Q96GW9 593 aaKnown RBP13.22□□□□□ -0.29
USH1C-207ENST00000527720 GP6Q9HCN6 339 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
USH1C-207ENST00000527720 ZNF503-AS2A6NEH8 195 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 NPBWR2P48146 333 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 DAZAP2Q15038 168 aaPredicted RBP13.21□□□□□ -0.29
USH1C-207ENST00000527720 MPV17LQ2QL34 196 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 GGNBP1Q5YKI7 109 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 ZNF585AQ6P3V2 769 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 GLRX5Q86SX6 157 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 MKXQ8IYA7 352 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 OR5A2Q8NGI9 324 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 PCNX2A6NKB5 2137 aa13.21□□□□□ -0.29
USH1C-207ENST00000527720 FREM2Q5SZK8 3169 aa13.21□□□□□ -0.3
USH1C-207ENST00000527720 DEDDO75618 318 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 BRICD5Q6PL45 260 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 NUFIP2Q7Z417 695 aaKnown RBP13.2□□□□□ -0.3
USH1C-207ENST00000527720 CCDC71LQ8N9Z2 235 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 HPSE2Q8WWQ2 592 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 RSRP1Q9BUV0 290 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 SLC2A9Q9NRM0 540 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 PCDHB10Q9UN67 800 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 BCL3P20749 454 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 HAAOP46952 286 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 SOX8P57073 446 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 TAGLNQ01995 201 aaKnown RBP13.2□□□□□ -0.3
USH1C-207ENST00000527720 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
USH1C-207ENST00000527720 TFAP2EQ6VUC0 442 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
USH1C-207ENST00000527720 MICU1Q9BPX6 476 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 LDAHQ9H6V9 325 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 ZFP57Q9NU63 452 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 RCC2Q9P258 522 aaKnown RBP13.2□□□□□ -0.3
USH1C-207ENST00000527720 R4GN57 208 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 NCOR1O75376 2440 aa13.2□□□□□ -0.3
USH1C-207ENST00000527720 GPR179Q6PRD1 2367 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 FAM221AA4D161 298 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 HKR1P10072 659 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 CCL2P13500 99 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 CD82P27701 267 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 GPM6AP51674 278 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 HERV-K104P61576 105 aa13.19□□□□□ -0.3
USH1C-207ENST00000527720 LIAT1Q6ZQX7 453 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms