RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 ZP1P60852 638 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 EDDM3AQ14507 147 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 LY6EQ16553 131 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 FBLN7Q53RD9 439 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SPIN3Q5JUX0 258 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 TMEM244Q5VVB8 128 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 XAF1Q6GPH4 301 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SLC35E4Q6ICL7 350 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 Q8IYB0 196 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SYS1Q8N2H4 156 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 PQLC1Q8N2U9 271 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 OR11H6Q8NGC7 330 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 OR5D18Q8NGL1 313 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 OR13C9Q8NGT0 318 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 RPS4Y2Q8TD47 263 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 WIPF2Q8TF74 440 aaPredicted RBP5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 RFT1Q96AA3 541 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 ZNF714Q96N38 554 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SPACA5Q96QH8 159 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 COMMD4Q9H0A8 199 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 PPA2Q9H2U2 334 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 MMP27Q9H306 513 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 RANBP3Q9H6Z4 567 aaPredicted RBP5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 ZNF702PQ9H963 129 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 ISG20L2Q9H9L3 353 aaKnown RBP5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SEBOXQ9HB31 216 aaPredicted RBP5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 ERVK13-1Q9NX77 482 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 HHLA2Q9UM44 414 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SLC7A11Q9UPY5 501 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SIGLEC9Q9Y336 463 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 SF3B6Q9Y3B4 125 aaKnown RBP5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 ORC6Q9Y5N6 252 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 GMPPBQ9Y5P6 360 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 LINC00312Q9Y6C7 94 aa5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 KMT2CQ8NEZ4 4911 aaKnown RBP5.5□□□□□ -1.53
PPFIA1-209ENST00000527612 IGHV2-26A0A0B4J1V2 119 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 A0A1W2PPH5 198 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 M0QZ24 198 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 TIMM23O14925 209 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 MMP23AO75900 390 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 OR2H2O95918 312 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 CSN2P05814 226 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 CHRM2P08172 466 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 HTR1AP08908 422 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 LIMS3P0CW19 117 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 LIMS4P0CW20 117 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 CALCBP10092 127 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 ZNF20P17024 532 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 PRKACAP17612 351 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 ATF1P18846 271 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 DUSP1P28562 367 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 GABRA5P31644 462 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 SNU13P55769 128 aaKnown RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 MTCP1P56278 107 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 P2RX3P56373 397 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 EDDM3BP56851 147 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 MEF2CQ06413 473 aaPredicted RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 PDZK1IP1Q13113 114 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 IL18R1Q13478 541 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 ALKBH1Q13686 389 aaKnown RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 GALEQ14376 348 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 GRK1Q15835 563 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 SMN1Q16637 294 aaKnown RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 PLA1AQ53H76 456 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 UTF1Q5T230 341 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 ZNF529Q6P280 563 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 CCBE1Q6UXH8 406 aaPredicted RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 BAIAP2L2Q6UXY1 529 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 LIAT1Q6ZQX7 453 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 CCDC121Q6ZUS5 278 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 LHFPL2Q6ZUX7 228 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 GDPD3Q7L5L3 318 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 KCTD20Q7Z5Y7 419 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 FAM58AQ8N1B3 248 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 Q8N2B8 174 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 PARP16Q8N5Y8 322 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 OR4S1Q8NGB4 309 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 OR52I1Q8NGK6 324 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 OR4P4Q8NGL7 312 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 OR13C3Q8NGS6 347 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 RHOXF1Q8NHV9 184 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 CFHR4Q92496 578 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 FGGYQ96C11 551 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 FOXRED1Q96CU9 486 aaPredicted RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 COQ2Q96H96 371 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 SNX22Q96L94 193 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 PDCD1LG2Q9BQ51 273 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 C9orf16Q9BUW7 83 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 JAM3Q9BX67 310 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 HEXA-AS1Q9H8Q6 139 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 S100A14Q9HCY8 104 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 HMG20AQ9NP66 347 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 AMBNQ9NP70 447 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 MRPS18AQ9NVS2 196 aaKnown RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 FBLN5Q9UBX5 448 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 TCF19Q9Y242 345 aa5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 TBL2Q9Y4P3 447 aaKnown RBP5.49□□□□□ -1.53
PPFIA1-209ENST00000527612 LOC100130705A0A1B0GUX0 176 aa5.48□□□□□ -1.53
PPFIA1-209ENST00000527612 hCG_1809904A0A1W2PP81 198 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms